RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	RPS2	P25443	254 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	DMC1	P25453	334 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	ATP11	P32453	318 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	PTK1	P36002	662 aa	Predicted RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	YKL023W	P36103	277 aa	Known RBP	2.74	□□□□□ -1.97
TFB1	YDR311W	DUG2	P38149	878 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	YHR218W	P38899	603 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	TIM44	Q01852	431 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	SHR3	Q02774	210 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	GRX3	Q03835	250 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	NDL1	Q06568	189 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	YFH1	Q07540	174 aa		2.74	□□□□□ -1.97
TFB1	YDR311W	LEU4	P06208	619 aa	Known RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	PEP5	P12868	1029 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	OM45	P16547	393 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	PPZ1	P26570	692 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	FUN19	P28003	413 aa	Predicted RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	SOR1	P35497	357 aa	Known RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	GDT1	P38301	280 aa	Predicted RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	MSG5	P38590	489 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	RRP4	P38792	359 aa	Known RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	GPI16	P38875	610 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	YEL020C	P39994	560 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	TFG2	P41896	400 aa	Predicted RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	YJR154W	P47181	346 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	RMD9	P53140	646 aa	Known RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	COP1	P53622	1201 aa	Known RBP	2.73	□□□□□ -1.97
TFB1	YDR311W	YPL014W	Q02606	381 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	SOR2	Q07786	357 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
TFB1	YDR311W	YOR012W	Q12351	137 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	NDJ1	Q12366	352 aa		2.73	□□□□□ -1.97
TFB1	YDR311W	SUC2	P00724	532 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	SCEI	P03882	235 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	ADE4	P04046	510 aa	Known RBP	2.72	□□□□□ -1.97
TFB1	YDR311W	GAL4	P04386	881 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	BAR1	P12630	587 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	DAL80	P26343	269 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	YPT53	P36019	220 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	MNL1	P38888	796 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	STN1	P38960	494 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	SAS2	P40963	338 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	POP1	P41812	875 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	NMD5	P46970	1048 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	TAX4	P47030	604 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	MPS2	P53159	387 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	ALF1	P53904	254 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	TPO3	Q06451	622 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	YDL218W	Q07629	317 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	ILV5	P06168	395 aa	Known RBP	2.72	□□□□□ -1.97
TFB1	YDR311W	NFT1	P0CE68	1218 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	TYR1	P20049	452 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	SAG1	P20840	650 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	RDS1	P25611	832 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	NDI1	P32340	513 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	RPA34	P47006	233 aa	Predicted RBP	2.72	□□□□□ -1.97
TFB1	YDR311W	PIB2	P53191	635 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	RRP46	P53256	223 aa	Predicted RBP	2.72	□□□□□ -1.97
TFB1	YDR311W	LGE1	Q02796	332 aa	Known RBP	2.72	□□□□□ -1.97
TFB1	YDR311W	FMP30	Q02883	468 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
TFB1	YDR311W	RKM5	Q12367	367 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	NBL1	Q3E7Y6	73 aa		2.72	□□□□□ -1.97
TFB1	YDR311W	GRR1	P24814	1151 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	SSE1	P32589	693 aa	Known RBP	2.71	□□□□□ -1.98
TFB1	YDR311W	YSC83	P32792	385 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	RRP1	P35178	278 aa	Predicted RBP	2.71	□□□□□ -1.98
TFB1	YDR311W	MRPL40	P36534	297 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	YBR139W	P38109	508 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	RRN10	P38204	145 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	SPP381	P38282	291 aa	Predicted RBP	2.71	□□□□□ -1.98
TFB1	YDR311W	LEU5	P38702	357 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	PAC2	P39937	518 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	YER130C	P39959	443 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	PHO86	P46956	311 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	YJR011C	P47086	261 aa	Predicted RBP	2.71	□□□□□ -1.98
TFB1	YDR311W	MRK1	P50873	501 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	SOL4	P53315	255 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	NUP100	Q02629	959 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	SMA1	Q02651	245 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	EKI1	Q03764	534 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	VPS20	Q04272	221 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	HSP31	Q04432	237 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	BSP1	Q06604	576 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	RDR1	Q08904	546 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	EDE1	P34216	1381 aa		2.71	□□□□□ -1.98
TFB1	YDR311W	RPN13	O13563	156 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	YPT1	P01123	206 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	RPB8	P20436	146 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	VPS17	P32913	551 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	STV1	P37296	890 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	QDR3	P38227	689 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	EFM2	P38347	419 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	LAG1	P38703	411 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	STP2	P38704	541 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	YHR177W	P38867	453 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	PHO90	P39535	881 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	QRI1	P43123	477 aa	Known RBP	2.7	□□□□□ -1.98
TFB1	YDR311W	IRC7	P43623	340 aa		2.7	□□□□□ -1.98
TFB1	YDR311W	PRM1	P53835	661 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms