RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	DSL1	P53847	754 aa		4.41	□□□□□ -1.7
NSE3	YDR288W	RPM2	Q02773	1202 aa		4.41	□□□□□ -1.7
NSE3	YDR288W	ARX1	Q03862	593 aa	Known RBP	4.41	□□□□□ -1.7
NSE3	YDR288W	ROY1	Q04847	553 aa		4.41	□□□□□ -1.7
NSE3	YDR288W	KEL3	Q08979	651 aa	Predicted RBP	4.41	□□□□□ -1.7
NSE3	YDR288W	RKM5	Q12367	367 aa		4.41	□□□□□ -1.7
NSE3	YDR288W	SET6	Q12529	373 aa		4.41	□□□□□ -1.7
NSE3	YDR288W	RPL20A	P0CX23	172 aa	Known RBP	4.4	□□□□□ -1.71
NSE3	YDR288W	RPL20B	P0CX24	172 aa	Predicted RBP	4.4	□□□□□ -1.71
NSE3	YDR288W	SPC110	P32380	944 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	YME2	P32843	850 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	PXA2	P34230	853 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	MTC4	P38335	694 aa	Known RBP	4.4	□□□□□ -1.71
NSE3	YDR288W	MDM31	P38880	579 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	ALG8	P40351	577 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	GWT1	P47026	490 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	KAP120	Q02932	1032 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	RMT2	Q03305	412 aa		4.4	□□□□□ -1.71
NSE3	YDR288W	YAR066W	P0CX18	203 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	YHR214W	P0CX19	203 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	ADK2	P26364	225 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	NIP100	P33420	868 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	SRP72	P38688	640 aa	Known RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	RPH1	P39956	796 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	YMR147W	P40218	223 aa	Known RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	VMA13	P41807	478 aa	Known RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	TFG2	P41896	400 aa	Predicted RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	YFR016C	P43597	1233 aa	Known RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	OGG1	P53397	376 aa	Predicted RBP	4.39	□□□□□ -1.71
NSE3	YDR288W	DON1	Q05610	365 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	HSP42	Q12329	375 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	SMC6	Q12749	1114 aa		4.39	□□□□□ -1.71
NSE3	YDR288W	RPL15A	P05748	204 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	FMP46	P36141	133 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	COS5	P47187	383 aa		4.38	□□□□□ -1.71
NSE3	YDR288W	YIF1	P53845	314 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	BNI5	P53890	448 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	HSP31	Q04432	237 aa		4.38	□□□□□ -1.71
NSE3	YDR288W	ERB1	Q04660	807 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	ERP1	Q05359	219 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	HCR1	Q05775	265 aa	Known RBP	4.38	□□□□□ -1.71
NSE3	YDR288W	COS7	Q07788	383 aa		4.38	□□□□□ -1.71
NSE3	YDR288W	AYT1	Q12226	474 aa		4.38	□□□□□ -1.71
NSE3	YDR288W	ERP4	Q12450	207 aa		4.38	□□□□□ -1.71
NSE3	YDR288W	YCR022C	P25620	114 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	NDI1	P32340	513 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	APE2	P32454	952 aa	Known RBP	4.37	□□□□□ -1.71
NSE3	YDR288W	PMU1	P36069	295 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	APE3	P37302	537 aa	Known RBP	4.37	□□□□□ -1.71
NSE3	YDR288W	DHH1	P39517	506 aa	Known RBP	4.37	□□□□□ -1.71
NSE3	YDR288W	RPR2	P40571	144 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	RPS0B	P46654	252 aa	Known RBP	4.37	□□□□□ -1.71
NSE3	YDR288W	ART5	P53244	586 aa	Known RBP	4.37	□□□□□ -1.71
NSE3	YDR288W	PNG1	Q02890	363 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	YDR387C	Q04162	555 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	PPT2	Q12036	173 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	YLR278C	Q05854	1341 aa		4.37	□□□□□ -1.71
NSE3	YDR288W	RPI1	P23250	407 aa	Known RBP	4.36	□□□□□ -1.71
NSE3	YDR288W	YCR100C	P25606	316 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	CRM1	P30822	1084 aa	Known RBP	4.36	□□□□□ -1.71
NSE3	YDR288W	ATS1	P31386	333 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	PRP21	P32524	280 aa	Predicted RBP	4.36	□□□□□ -1.71
NSE3	YDR288W	MMS4	P38257	691 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	HAT2	P39984	401 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	ZIM17	P42844	174 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	PCP1	P53259	346 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	SKO1	Q02100	647 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	YDR131C	Q03899	556 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	VAM3	Q12241	283 aa		4.36	□□□□□ -1.71
NSE3	YDR288W	GDH1	P07262	454 aa	Known RBP	4.35	□□□□□ -1.71
NSE3	YDR288W	RIP1	P08067	215 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	ATR1	P13090	542 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	CLB1	P24868	471 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	VMA8	P32610	256 aa	Known RBP	4.35	□□□□□ -1.71
NSE3	YDR288W	YHR054C	P38780	354 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	YJL213W	P40896	331 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	PIR3	Q03180	325 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	MUM3	Q08750	479 aa		4.35	□□□□□ -1.71
NSE3	YDR288W	MCK1	P21965	375 aa	Known RBP	4.34	□□□□□ -1.71
NSE3	YDR288W	BEM1	P29366	551 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	YCR041W	P37265	110 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	CAK1	P43568	368 aa	Predicted RBP	4.34	□□□□□ -1.71
NSE3	YDR288W	YMR130W	Q04223	302 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	AIM32	Q04689	311 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	REX4	Q08237	289 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	VPS54	Q12071	889 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	RRD2	Q12461	358 aa		4.34	□□□□□ -1.71
NSE3	YDR288W	HIS4	P00815	799 aa	Known RBP	4.33	□□□□□ -1.72
NSE3	YDR288W	URA4	P20051	364 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	RHB1	P25378	209 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	YUR1	P26725	428 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	ERV1	P27882	189 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	URA7	P28274	579 aa	Known RBP	4.33	□□□□□ -1.72
NSE3	YDR288W	BRF1	P29056	596 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	HIR2	P32480	875 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	YBP1	P38315	674 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	CCT2	P39076	527 aa	Known RBP	4.33	□□□□□ -1.72
NSE3	YDR288W	ECM27	P47144	725 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	AVT4	P50944	713 aa		4.33	□□□□□ -1.72
NSE3	YDR288W	POP6	P53218	158 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms