RNA–Protein interactions for RNA: YDR003W

RCR2, Transcript of Vacuolar protein, yeast

Gene RCR2, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR2	YDR003W	YNL092W	P53934	400 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	RSF1	Q05043	376 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	BUD7	Q08754	746 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	LCB4	Q12246	624 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	GPM3	Q12326	303 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	YPT6	Q99260	215 aa		4.06	□□□□□ -1.76
RCR2	YDR003W	SPT15	P13393	240 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	ABF1	P14164	731 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RCR2	YDR003W	PAP1	P29468	568 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	RRP3	P38712	501 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	FAU1	P40099	211 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	TCB2	P48231	1178 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	ASN1	P49089	572 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	YGR054W	P53235	642 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	HOT1	Q03213	719 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	YDR239C	Q03780	787 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	ARX1	Q03862	593 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	ROY1	Q04847	553 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	YOR387C	Q08910	206 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	SAM4	Q08985	325 aa	Known RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	SWT1	Q12104	458 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	YOR097C	Q12274	175 aa	Predicted RBP	4.05	□□□□□ -1.76
RCR2	YDR003W	FRE7	Q12333	620 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	NAG1	Q8TGN9	163 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	AFI1	Q99222	893 aa		4.05	□□□□□ -1.76
RCR2	YDR003W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RCR2	YDR003W	YML003W	P0CF16	290 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	THR4	P16120	514 aa	Known RBP	4.04	□□□□□ -1.76
RCR2	YDR003W	ARF2	P19146	181 aa	Known RBP	4.04	□□□□□ -1.76
RCR2	YDR003W	REC107	P21651	314 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	YCR061W	P25639	631 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	KDX1	P36005	433 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	SEC24	P40482	926 aa	Known RBP	4.04	□□□□□ -1.76
RCR2	YDR003W	SER33	P40510	469 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	PCI8	P40512	444 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	GUF1	P46943	645 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	BIR1	P47134	954 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	YGR066C	P53242	292 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	SMX3	P54999	86 aa	Predicted RBP	4.04	□□□□□ -1.76
RCR2	YDR003W	VHS1	Q03785	461 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	SGT2	Q12118	346 aa	Known RBP	4.04	□□□□□ -1.76
RCR2	YDR003W	YKL033W-A	Q86ZR7	236 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	ISN1	Q99312	450 aa		4.04	□□□□□ -1.76
RCR2	YDR003W	YBR085C-A	O43137	85 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	SIR3	P06701	978 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	FRS2	P15625	503 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	POL30	P15873	258 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	EST1	P17214	699 aa	Predicted RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	CPR2	P23285	205 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	LDB16	P25587	256 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	ADY2	P25613	283 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	SRB5	P32585	307 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	KES1	P35844	434 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	AGP2	P38090	596 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	SIP3	P38717	1229 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	GND1	P38720	489 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	PIH1	P38768	344 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	PIG2	P40187	538 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	RSM25	P40496	264 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	YGL138C	P53122	345 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	RET3	P53600	189 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	YPL113C	Q02961	396 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	RTN1	Q04947	295 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	VPS38	Q05919	439 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	YSH1	Q06224	779 aa	Predicted RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RCR2	YDR003W	CDC45	Q08032	650 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	SLK19	Q08581	821 aa	Known RBP	4.03	□□□□□ -1.76
RCR2	YDR003W	SKS1	Q12505	502 aa		4.03	□□□□□ -1.76
RCR2	YDR003W	HIS4	P00815	799 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	VPS34	P22543	875 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	PRP28	P23394	588 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	FRE1	P32791	686 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	PMT1	P33775	817 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	YHR097C	P38809	366 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	CCT6	P39079	546 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	YJL206C	P39529	758 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	NDC80	P40460	691 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	CTK2	P46962	323 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	OCA1	P50946	238 aa	Predicted RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	TOF1	P53840	1238 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	YNL058C	P53947	316 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	ARK1	P53974	638 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	EFR3	Q03653	782 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	RPC11	Q04307	110 aa	Predicted RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	DPB4	Q04603	196 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	GTB1	Q04924	702 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	CLP1	Q08685	445 aa	Predicted RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	ATG29	Q12092	213 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	CHS5	Q12114	671 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	TMS1	Q12116	473 aa		4.02	□□□□□ -1.77
RCR2	YDR003W	YRA1	Q12159	226 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	PRS5	Q12265	496 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	SEC16	P48415	2195 aa	Known RBP	4.02	□□□□□ -1.77
RCR2	YDR003W	ARD1	P07347	238 aa	Predicted RBP	4.01	□□□□□ -1.77
RCR2	YDR003W	RFA2	P26754	273 aa	Known RBP	4.01	□□□□□ -1.77
RCR2	YDR003W	MVD1	P32377	396 aa	Known RBP	4.01	□□□□□ -1.77
RCR2	YDR003W	MSS1	P32559	526 aa	Predicted RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms