RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI1	YDL216C	RTN2	Q12443	393 aa		4.09	□□□□□ -1.75
RRI1	YDL216C	NDI1	P32340	513 aa		4.08	□□□□□ -1.76
RRI1	YDL216C	TIF5	P38431	405 aa	Known RBP	4.08	□□□□□ -1.76
RRI1	YDL216C	KEL1	P38853	1164 aa	Known RBP	4.08	□□□□□ -1.76
RRI1	YDL216C	MSO1	P53604	210 aa	Known RBP	4.08	□□□□□ -1.76
RRI1	YDL216C	CAF40	P53829	373 aa		4.08	□□□□□ -1.76
RRI1	YDL216C	CBS2	P14905	389 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	ATP10	P18496	279 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	NPL6	P32832	435 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	VTC2	P43585	828 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	BOR1	P53838	576 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	YLR287C	Q05881	355 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	SFI1	Q12369	946 aa		4.07	□□□□□ -1.76
RRI1	YDL216C	PMR1	P13586	950 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	CLC1	P17891	233 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	CLB3	P24870	427 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	ISC1	P40015	477 aa	Known RBP	4.06	□□□□□ -1.76
RRI1	YDL216C	VMA13	P41807	478 aa	Known RBP	4.06	□□□□□ -1.76
RRI1	YDL216C	TFG2	P41896	400 aa	Predicted RBP	4.06	□□□□□ -1.76
RRI1	YDL216C	WSC2	P53832	503 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	PNG1	Q02890	363 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	PIR3	Q03180	325 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	HNT3	Q08702	217 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	YLL056C	Q12177	298 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	SCM3	Q12334	223 aa		4.06	□□□□□ -1.76
RRI1	YDL216C	GPH1	P06738	902 aa	Known RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	YAR066W	P0CX18	203 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	YHR214W	P0CX19	203 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	CPR1	P14832	162 aa	Known RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	RNA14	P25298	677 aa	Known RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	IDH2	P28241	369 aa	Known RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	ERG3	P32353	365 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	THI2	P38141	450 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	MNP1	P53163	194 aa	Predicted RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	ODC1	Q03028	310 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	SYF1	Q04048	859 aa	Predicted RBP	4.05	□□□□□ -1.76
RRI1	YDL216C	TLG2	Q08144	397 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	YCL021W-A	Q96VH3	125 aa		4.05	□□□□□ -1.76
RRI1	YDL216C	HIP1	P06775	603 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	RPL3	P14126	387 aa	Known RBP	4.04	□□□□□ -1.76
RRI1	YDL216C	YCR100C	P25606	316 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	HXT3	P32466	567 aa	Known RBP	4.04	□□□□□ -1.76
RRI1	YDL216C	GLC7	P32598	312 aa	Known RBP	4.04	□□□□□ -1.76
RRI1	YDL216C	HCS1	P34243	683 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	PCA1	P38360	1216 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	GCD10	P41814	478 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	DLD2	P46681	530 aa	Known RBP	4.04	□□□□□ -1.76
RRI1	YDL216C	AVT4	P50944	713 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	DSL1	P53847	754 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	ARK1	P53974	638 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	RRD2	Q12461	358 aa		4.04	□□□□□ -1.76
RRI1	YDL216C	PPH22	P23595	377 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	NFU1	P32860	256 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	MRP4	P32902	394 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	NIP100	P33420	868 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	AVT5	P38176	459 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	MKT1	P40850	830 aa	Known RBP	4.03	□□□□□ -1.76
RRI1	YDL216C	RRT5	P43607	289 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	FMS1	P50264	508 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	POP6	P53218	158 aa		4.03	□□□□□ -1.76
RRI1	YDL216C	PGA3	Q12746	312 aa	Known RBP	4.03	□□□□□ -1.76
RRI1	YDL216C	YPI1	P43587	155 aa		4.02	□□□□□ -1.77
RRI1	YDL216C	SSN8	P47821	323 aa		4.02	□□□□□ -1.77
RRI1	YDL216C	YGL242C	P53066	181 aa		4.02	□□□□□ -1.77
RRI1	YDL216C	ART5	P53244	586 aa	Known RBP	4.02	□□□□□ -1.77
RRI1	YDL216C	IBD2	P53892	351 aa		4.02	□□□□□ -1.77
RRI1	YDL216C	RPA49	Q01080	415 aa	Predicted RBP	4.02	□□□□□ -1.77
RRI1	YDL216C	HSP31	Q04432	237 aa		4.02	□□□□□ -1.77
RRI1	YDL216C	YIM1	P28625	365 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	PRP21	P32524	280 aa	Predicted RBP	4.01	□□□□□ -1.77
RRI1	YDL216C	SAS3	P34218	831 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	VHC1	P38329	1120 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	CCT2	P39076	527 aa	Known RBP	4.01	□□□□□ -1.77
RRI1	YDL216C	YFL067W	P43537	175 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	TRS85	P46944	698 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	MRP51	Q02950	344 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	RRN11	Q04712	507 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	RSA1	Q08932	381 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	YPL199C	Q08954	240 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	YOL159C-A	Q3E769	90 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	YLR278C	Q05854	1341 aa		4.01	□□□□□ -1.77
RRI1	YDL216C	HIS4	P00815	799 aa	Known RBP	4	□□□□□ -1.77
RRI1	YDL216C	RIP1	P08067	215 aa		4	□□□□□ -1.77
RRI1	YDL216C	HEM15	P16622	393 aa		4	□□□□□ -1.77
RRI1	YDL216C	FUR1	P18562	216 aa	Known RBP	4	□□□□□ -1.77
RRI1	YDL216C	ECM25	P32525	599 aa		4	□□□□□ -1.77
RRI1	YDL216C	YCR041W	P37265	110 aa		4	□□□□□ -1.77
RRI1	YDL216C	YBR139W	P38109	508 aa		4	□□□□□ -1.77
RRI1	YDL216C	NOC2	P39744	710 aa	Known RBP	4	□□□□□ -1.77
RRI1	YDL216C	YIP1	P53039	248 aa		4	□□□□□ -1.77
RRI1	YDL216C	SPC19	Q03954	165 aa		4	□□□□□ -1.77
RRI1	YDL216C	MUM3	Q08750	479 aa		4	□□□□□ -1.77
RRI1	YDL216C	REC107	P21651	314 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	NAT2	P37293	288 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	ARA1	P38115	344 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	ECM27	P47144	725 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	PCP1	P53259	346 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	YDR387C	Q04162	555 aa		3.99	□□□□□ -1.77
RRI1	YDL216C	RRP45	Q05636	305 aa	Known RBP	3.99	□□□□□ -1.77
RRI1	YDL216C	HSP42	Q12329	375 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 100 ms