RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeastyeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC31YDL195W AVT2P39981 480 aa1.98□□□□□ -2.09
SEC31YDL195W HAT2P39984 401 aa1.98□□□□□ -2.09
SEC31YDL195W VRG4P40107 337 aa1.98□□□□□ -2.09
SEC31YDL195W CAB2P40506 365 aa1.98□□□□□ -2.09
SEC31YDL195W YFR020WP43600 232 aa1.98□□□□□ -2.09
SEC31YDL195W PFD1P46988 109 aa1.98□□□□□ -2.09
SEC31YDL195W YJR154WP47181 346 aa1.98□□□□□ -2.09
SEC31YDL195W ALT1P52893 592 aa1.98□□□□□ -2.09
SEC31YDL195W ALG11P53954 548 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W GPD1Q00055 391 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W PRP38Q00723 242 aaPredicted RBP1.98□□□□□ -2.09
SEC31YDL195W NUP100Q02629 959 aa1.98□□□□□ -2.09
SEC31YDL195W SPO19Q03029 223 aa1.98□□□□□ -2.09
SEC31YDL195W ABZ2Q03266 374 aa1.98□□□□□ -2.09
SEC31YDL195W RCR2Q03446 210 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W NHX1Q04121 633 aa1.98□□□□□ -2.09
SEC31YDL195W YLR446WQ06204 433 aa1.98□□□□□ -2.09
SEC31YDL195W NGL1Q08213 363 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W LYS21Q12122 440 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W NSL1Q12143 216 aa1.98□□□□□ -2.09
SEC31YDL195W SCM3Q12334 223 aa1.98□□□□□ -2.09
SEC31YDL195W RPL24AP04449 155 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W CDC31P06704 161 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W APE1P14904 514 aa1.98□□□□□ -2.09
SEC31YDL195W SIS1P25294 352 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W YCR090CP25654 182 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W RRP4P38792 359 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W SIT1P39980 628 aa1.98□□□□□ -2.09
SEC31YDL195W EDC3P39998 551 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W ISC1P40015 477 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W QRI7P43122 407 aa1.98□□□□□ -2.09
SEC31YDL195W YGR067CP53243 804 aa1.98□□□□□ -2.09
SEC31YDL195W COP1P53622 1201 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W YNR065CP53751 1116 aa1.98□□□□□ -2.09
SEC31YDL195W PNG1Q02890 363 aa1.98□□□□□ -2.09
SEC31YDL195W TIF35Q04067 274 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W RCO1Q04779 684 aa1.98□□□□□ -2.09
SEC31YDL195W HDA2Q06629 674 aa1.98□□□□□ -2.09
SEC31YDL195W THI20Q08224 551 aa1.98□□□□□ -2.09
SEC31YDL195W TRM8Q12009 286 aa1.98□□□□□ -2.09
SEC31YDL195W SMF3Q12078 473 aaPredicted RBP1.98□□□□□ -2.09
SEC31YDL195W ICT1Q12385 394 aa1.98□□□□□ -2.09
SEC31YDL195W GAL7P08431 366 aa1.98□□□□□ -2.09
SEC31YDL195W PUT1P09368 476 aa1.98□□□□□ -2.09
SEC31YDL195W REV1P12689 985 aa1.98□□□□□ -2.09
SEC31YDL195W CBS2P14905 389 aa1.98□□□□□ -2.09
SEC31YDL195W UBA1P22515 1024 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W PTP1P25044 335 aa1.98□□□□□ -2.09
SEC31YDL195W PAT1P25644 796 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W RIB7P33312 244 aa1.98□□□□□ -2.09
SEC31YDL195W YBR137WP38276 179 aa1.98□□□□□ -2.09
SEC31YDL195W HRB1P38922 454 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SEC31YDL195W PTI1P39927 425 aaPredicted RBP1.98□□□□□ -2.09
SEC31YDL195W GAB1P41733 394 aa1.98□□□□□ -2.09
SEC31YDL195W GUS1P46655 708 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SEC31YDL195W AIF1P52923 378 aa1.98□□□□□ -2.09
SEC31YDL195W MRH4P53166 561 aa1.98□□□□□ -2.09
SEC31YDL195W HOP2P53187 214 aa1.98□□□□□ -2.09
SEC31YDL195W NOP13P53883 403 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SEC31YDL195W ELP3Q02908 557 aaKnown RBP1.98□□□□□ -2.09
SEC31YDL195W HRD3Q05787 833 aa1.98□□□□□ -2.09
SEC31YDL195W STP3Q05937 343 aa1.98□□□□□ -2.09
SEC31YDL195W MCM21Q06675 368 aa1.98□□□□□ -2.09
SEC31YDL195W MFG1Q07684 458 aa1.98□□□□□ -2.09
SEC31YDL195W ISU2Q12056 156 aa1.98□□□□□ -2.09
SEC31YDL195W HER1Q12276 1246 aa1.98□□□□□ -2.09
SEC31YDL195W ATG34Q12292 412 aa1.98□□□□□ -2.09
SEC31YDL195W GPR1Q12361 961 aa1.98□□□□□ -2.09
SEC31YDL195W ZPS1Q12512 249 aa1.98□□□□□ -2.09
SEC31YDL195W RPP2BP02400 110 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W HSC82P15108 705 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W PTC6P25646 442 aa1.97□□□□□ -2.09
SEC31YDL195W CIN8P27895 1000 aa1.97□□□□□ -2.09
SEC31YDL195W UGP1P32861 499 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W MDJ1P35191 511 aa1.97□□□□□ -2.09
SEC31YDL195W YBR138CP38277 524 aa1.97□□□□□ -2.09
SEC31YDL195W TSL1P38427 1098 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W CYC2P38909 366 aa1.97□□□□□ -2.09
SEC31YDL195W FAD1P38913 306 aa1.97□□□□□ -2.09
SEC31YDL195W GGC1P38988 300 aa1.97□□□□□ -2.09
SEC31YDL195W PRM9P39551 298 aa1.97□□□□□ -2.09
SEC31YDL195W IRC7P43623 340 aa1.97□□□□□ -2.09
SEC31YDL195W CSL4P53859 292 aaPredicted RBP1.97□□□□□ -2.09
SEC31YDL195W NAM8Q00539 523 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SEC31YDL195W MMT1Q03218 510 aa1.97□□□□□ -2.09
SEC31YDL195W MUS81Q04149 632 aaPredicted RBP1.97□□□□□ -2.09
SEC31YDL195W OPT2Q06593 877 aa1.97□□□□□ -2.09
SEC31YDL195W TPO1Q07824 586 aa1.97□□□□□ -2.09
SEC31YDL195W RRT8Q08219 342 aa1.97□□□□□ -2.09
SEC31YDL195W PST2Q12335 198 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W PFK27Q12471 397 aaPredicted RBP1.97□□□□□ -2.09
SEC31YDL195W MHT1Q12525 324 aa1.97□□□□□ -2.09
SEC31YDL195W TY1A-DR4O74302 440 aa1.97□□□□□ -2.09
SEC31YDL195W PRT1P06103 763 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W TY1A-HP0C2I4 478 aaKnown RBP1.97□□□□□ -2.09
SEC31YDL195W TY1A-AP0CX57 440 aa1.97□□□□□ -2.09
SEC31YDL195W TY1A-PR1P0CX58 440 aa1.97□□□□□ -2.09
SEC31YDL195W TY1A-ORP0CX59 440 aa1.97□□□□□ -2.09
SEC31YDL195W TY1A-PR2P0CX60 440 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms