RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	YKL023W	P36103	277 aa	Known RBP	4.82	□□□□□ -1.64
SMP1	YBR182C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SMP1	YBR182C	YMR147W	P40218	223 aa	Known RBP	4.82	□□□□□ -1.64
SMP1	YBR182C	AGX1	P43567	385 aa		4.82	□□□□□ -1.64
SMP1	YBR182C	SNG1	P46950	547 aa		4.82	□□□□□ -1.64
SMP1	YBR182C	DUG3	P53871	357 aa		4.82	□□□□□ -1.64
SMP1	YBR182C	APM1	Q00776	475 aa	Predicted RBP	4.82	□□□□□ -1.64
SMP1	YBR182C	KAP95	Q06142	861 aa	Known RBP	4.82	□□□□□ -1.64
SMP1	YBR182C	NDJ1	Q12366	352 aa		4.82	□□□□□ -1.64
SMP1	YBR182C	VPS63	O13549	108 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	BI2	P03873	423 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	ATP10	P18496	279 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	PMA2	P19657	947 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	CLB2	P24869	491 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	YCR006C	P25350	157 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	HSP104	P31539	908 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	ATP3	P38077	311 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	BNA4	P38169	460 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	KAP104	P38217	918 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	EFM2	P38347	419 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	TOM71	P38825	639 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	EXO1	P39875	702 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	MPS2	P53159	387 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	ZPR1	P53303	486 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	YTP1	P53584	459 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	YVH1	Q02256	364 aa	Known RBP	4.81	□□□□□ -1.64
SMP1	YBR182C	SMA1	Q02651	245 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	ATG26	Q06321	1198 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	IPK1	Q06667	281 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	BUG1	Q12191	341 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	NCE102	Q12207	173 aa	RIP-Chip data	4.81	□□□□□ -1.64	not detected
SMP1	YBR182C	SUT2	Q12286	268 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	RRD2	Q12461	358 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	SFG1	Q12507	346 aa		4.81	□□□□□ -1.64
SMP1	YBR182C	SCEI	P03882	235 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	SUP35	P05453	685 aa	Known RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	TCM62	P38228	572 aa	Known RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	PCA1	P38360	1216 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	TIF5	P38431	405 aa	Known RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	LIN1	P38852	340 aa	Predicted RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	MNL1	P38888	796 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	GCD10	P41814	478 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	TFG2	P41896	400 aa	Predicted RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	ASN1	P49089	572 aa	Known RBP	4.8	□□□□□ -1.64
SMP1	YBR182C	ROG1	P53118	685 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	EKI1	Q03764	534 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	ECM18	Q04623	453 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	CUR1	Q06469	252 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	APC5	Q08683	685 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SMP1	YBR182C	RUP1	Q12242	671 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	SAC3	P46674	1301 aa		4.8	□□□□□ -1.64
SMP1	YBR182C	SAG1	P20840	650 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	CNA1	P23287	553 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	CBP4	P37267	147 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	ROT2	P38138	954 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	RRN10	P38204	145 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	SPC97	P38863	823 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	POP1	P41812	875 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	LYS20	P48570	428 aa	Known RBP	4.79	□□□□□ -1.64
SMP1	YBR182C	PYK2	P52489	506 aa	Known RBP	4.79	□□□□□ -1.64
SMP1	YBR182C	YMR206W	Q03695	313 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	SNU56	Q03782	492 aa	Known RBP	4.79	□□□□□ -1.64
SMP1	YBR182C	SMA2	Q04658	369 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	YLR297W	Q05899	129 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	NSE1	Q07913	336 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	ACF2	Q12168	779 aa		4.79	□□□□□ -1.64
SMP1	YBR182C	RUD3	Q12234	484 aa	Known RBP	4.79	□□□□□ -1.64
SMP1	YBR182C	MRPL23	Q12487	163 aa	Predicted RBP	4.79	□□□□□ -1.64
SMP1	YBR182C	ADE4	P04046	510 aa	Known RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	HEM1	P09950	548 aa	Predicted RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	SNF3	P10870	884 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	PRP21	P32524	280 aa	Predicted RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	RPC34	P32910	317 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	DUG2	P38149	878 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	UBA4	P38820	440 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	STN1	P38960	494 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	END3	P39013	349 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	PCF11	P39081	626 aa	Predicted RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	CDC1	P40986	491 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	YHC3	P47040	408 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	BRO1	P48582	844 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	ORC5	P50874	479 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	YGR266W	P53326	701 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	SHR3	Q02774	210 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	MDM30	Q05930	598 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	SEC3	P33332	1336 aa	Known RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	YER145C-A	A0A023PYF4	145 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	STE2	D6VTK4	431 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	COX3	P00420	269 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	RNR2	P09938	399 aa	Known RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	PEP5	P12868	1029 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	THR4	P16120	514 aa	Known RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	MSN2	P33748	704 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	HSM3	P38348	480 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	RFC3	P38629	340 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	LOC1	P43586	204 aa	Predicted RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	YJR011C	P47086	261 aa	Predicted RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	SMM1	P53720	384 aa	Known RBP	4.78	□□□□□ -1.64
SMP1	YBR182C	HSP31	Q04432	237 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms