RNA–Protein interactions for RNA: YBR091C

TIM12, Transcript of Essential protein of the inner mitochondrial membrane, yeast

Gene TIM12, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM12	YBR091C	BIK1	P11709	440 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	PUT4	P15380	627 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	PRP4	P20053	465 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	PRE2	P30656	287 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	SIN4	P32259	974 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	STE14	P32584	239 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	RFT1	P38206	574 aa	Predicted RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	CDS1	P38221	457 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	COS111	P38308	924 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	DED81	P38707	554 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	LYS9	P38999	446 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	FLC2	P39719	783 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	GDI1	P39958	451 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	YER130C	P39959	443 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	YEL028W	P39989	153 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	LSM5	P40089	93 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	DJP1	P40564	432 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	SNZ3	P43545	298 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	YJR030C	P47101	745 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
TIM12	YBR091C	SNZ2	P53824	298 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	IPI3	P53877	555 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	VPS9	P54787	451 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	HMO1	Q03973	246 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	HOF1	Q05080	669 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	AIM6	Q07716	390 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	ADY3	Q07732	790 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	PSR1	Q07800	427 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	PLB3	Q08108	686 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	TGL5	Q12043	749 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	NPC2	Q12408	173 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	OCA6	Q12454	224 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	RRP12	Q12754	1228 aa	Known RBP	3.1	□□□□□ -1.91
TIM12	YBR091C	BI3	Q9ZZW7	517 aa		3.1	□□□□□ -1.91
TIM12	YBR091C	STF1	P01098	86 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	RPB2	P08518	1224 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	ILS1	P09436	1072 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	CLC1	P17891	233 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	VPS33	P20795	691 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	REC107	P21651	314 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	AAT2	P23542	418 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	ERG8	P24521	451 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	CLB3	P24870	427 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	KRR1	P25586	316 aa	Predicted RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	RFA2	P26754	273 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	NTH1	P32356	751 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	DCG1	P32460	244 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YPT7	P32939	208 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	MDL1	P33310	695 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	SKN1	P33336	771 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	KAE1	P36132	386 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	SRO77	P38163	1010 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	IML3	P38265	245 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	TDP1	P38319	544 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	MCX1	P38323	520 aa	Predicted RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	MTG2	P38860	518 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	LNP1	P38878	278 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YHR210C	P38893	341 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	LYS1	P38998	373 aa	RIP-Chip data	3.09	□□□□□ -1.91	not detected
TIM12	YBR091C	PSD1	P39006	500 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	CCT6	P39079	546 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YJL193W	P39542	402 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	GET2	P40056	285 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	TMN3	P40071	706 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	PIG2	P40187	538 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	LRO1	P40345	661 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	ATM1	P40416	690 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YIL054W	P40524	105 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	RRT5	P43607	289 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	DLD2	P46681	530 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	YJL055W	P47044	245 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YDL183C	P48569	320 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YGL108C	P53139	140 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	FRE4	P53746	719 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	TEX1	P53851	422 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	YNL143C	P53908	130 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	FDC1	Q03034	503 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	NGL3	Q03210	505 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YMR160W	Q03823	816 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	YDR286C	Q05530	114 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	SWC7	Q06707	132 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	VAM6	Q07468	1049 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	CMS1	Q07897	291 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	CIR2	Q08822	631 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	NMD4	Q12129	218 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	PNO1	Q99216	274 aa	Known RBP	3.09	□□□□□ -1.91
TIM12	YBR091C	YOR338W	Q99326	363 aa		3.09	□□□□□ -1.91
TIM12	YBR091C	CYC7	P00045	113 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	RPL7A	P05737	244 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	BCY1	P07278	416 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	PWP1	P21304	576 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	UBA1	P22515	1024 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	DCC1	P25559	380 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	EMC1	P25574	760 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	POL4	P25615	582 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	FEN2	P25621	512 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	CPR3	P25719	182 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	SPC110	P32380	944 aa		3.08	□□□□□ -1.92
TIM12	YBR091C	HXT3	P32466	567 aa	Known RBP	3.08	□□□□□ -1.92
TIM12	YBR091C	CDC13	P32797	924 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms