RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	YMR155W	Q03795	547 aa		13.96	□□□□□ -0.17
SSA3	YBL075C	FRE1	P32791	686 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	NOP4	P37838	685 aa	Known RBP	13.96	□□□□□ -0.18
SSA3	YBL075C	OTU2	P38747	307 aa	Known RBP	13.96	□□□□□ -0.18
SSA3	YBL075C	PCL6	P40038	420 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	NUP49	Q02199	472 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	TRS130	Q03660	1102 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	VPS74	Q06385	345 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	CUR1	Q06469	252 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	GPI11	Q06636	219 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	YDR524C-B	Q3E6R4	66 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	FRT1	Q99332	602 aa		13.96	□□□□□ -0.18
SSA3	YBL075C	ARG81	P05085	880 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	SDH2	P21801	266 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	DBF20	P32328	564 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	YBL029W	P38201	376 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	CRP1	P38845	465 aa	Known RBP	13.95	□□□□□ -0.18
SSA3	YBL075C	YJL016W	P47072	561 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	CUL3	P53202	744 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	SOK2	P53438	785 aa	Predicted RBP	13.95	□□□□□ -0.18
SSA3	YBL075C	NMA111	P53920	997 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	PML39	Q03760	334 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	SWA2	Q06677	668 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	ENV7	Q12003	364 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	OSW2	Q12202	724 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	YOR019W	Q99248	730 aa		13.95	□□□□□ -0.18
SSA3	YBL075C	COS2	P0CX12	379 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	COS3	P0CX13	379 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	NTG1	P31378	399 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	TIM23	P32897	222 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	MRT4	P33201	236 aa	Known RBP	13.94	□□□□□ -0.18
SSA3	YBL075C	PTI1	P39927	425 aa	Predicted RBP	13.94	□□□□□ -0.18
SSA3	YBL075C	BFA1	P47113	574 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	OKP1	P53298	406 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	REC102	Q02721	264 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	ARL3	Q02804	198 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	SVL3	Q03088	825 aa	Known RBP	13.94	□□□□□ -0.18
SSA3	YBL075C	SPO77	Q06134	477 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	HFI1	Q12060	488 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	TAO3	P40468	2376 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	ATP1	P07251	545 aa	Known RBP	13.94	□□□□□ -0.18
SSA3	YBL075C	DRE2	P36152	348 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	OSH7	P38755	437 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	SLD7	Q08457	257 aa		13.94	□□□□□ -0.18
SSA3	YBL075C	PST2	Q12335	198 aa	Known RBP	13.94	□□□□□ -0.18
SSA3	YBL075C	MOD5	P07884	428 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	PUP3	P25451	205 aa	Known RBP	13.93	□□□□□ -0.18
SSA3	YBL075C	ROT2	P38138	954 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	PRS2	P38620	318 aa	Known RBP	13.93	□□□□□ -0.18
SSA3	YBL075C	AIM24	P47127	394 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	ASN1	P49089	572 aa	Known RBP	13.93	□□□□□ -0.18
SSA3	YBL075C	POP6	P53218	158 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	EGD1	Q02642	157 aa	Known RBP	13.93	□□□□□ -0.18
SSA3	YBL075C	UGO1	Q03327	502 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	YLR224W	Q05947	369 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	ECM30	Q06673	1274 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	RIB3	Q99258	208 aa		13.93	□□□□□ -0.18
SSA3	YBL075C	MER1	P16523	270 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	MSS51	P32335	436 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.92	□□□□□ -0.18	not detected
SSA3	YBL075C	CBR1	P38626	284 aa	Known RBP	13.92	□□□□□ -0.18
SSA3	YBL075C	YGR168C	P53293	376 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	YMR160W	Q03823	816 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	YLR283W	Q05867	314 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	LDB19	Q12502	818 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	CMC2	Q3E7A4	109 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	RPP1A	P05318	106 aa	Predicted RBP	13.92	□□□□□ -0.18
SSA3	YBL075C	DPH2	P32461	534 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	VPS17	P32913	551 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	MKS1	P34072	584 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	APT2	P36973	181 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	SIF2	P38262	535 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	PCM1	P38628	557 aa	Known RBP	13.92	□□□□□ -0.18
SSA3	YBL075C	TPO1	Q07824	586 aa		13.92	□□□□□ -0.18
SSA3	YBL075C	GCN4	P03069	281 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	APA2	P22108	325 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	PHO91	P27514	894 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	LYP1	P32487	611 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	MRPL6	P32904	214 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	ROK1	P45818	564 aa	Predicted RBP	13.91	□□□□□ -0.18
SSA3	YBL075C	AIF1	P52923	378 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	PUS2	P53167	370 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	JAC1	P53193	184 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	MTD1	Q02046	320 aa	Known RBP	13.91	□□□□□ -0.18
SSA3	YBL075C	MRPS16	Q02608	121 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	RMI1	Q02685	241 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	PHO92	Q06390	306 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	HDA3	Q06623	655 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	DCN1	Q12395	269 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	THP2	O13539	261 aa	Known RBP	13.91	□□□□□ -0.18
SSA3	YBL075C	AMD2	P22580	549 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	PRP28	P23394	588 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	ROM1	P53046	1155 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	BUD32	P53323	261 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	NHP10	Q03435	203 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	SVS1	Q12254	260 aa		13.91	□□□□□ -0.18
SSA3	YBL075C	LAA1	P39526	2014 aa		13.9	□□□□□ -0.18
SSA3	YBL075C	LAT1	P12695	482 aa	Known RBP	13.9	□□□□□ -0.18
SSA3	YBL075C	PRM2	P40534	656 aa		13.9	□□□□□ -0.18
SSA3	YBL075C	REG1	Q00816	1014 aa		13.9	□□□□□ -0.18

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms