RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 MPM1P40364 252 aa8.42□□□□□ -1.06
LSR1LSR1 FAR7P43592 221 aa8.42□□□□□ -1.06
LSR1LSR1 BFA1P47113 574 aa8.42□□□□□ -1.06
LSR1LSR1 ATH1P48016 1211 aa8.42□□□□□ -1.06
LSR1LSR1 AIM14P53109 570 aa8.42□□□□□ -1.06
LSR1LSR1 RSC9Q03124 581 aa8.42□□□□□ -1.06
LSR1LSR1 ARP10Q04549 284 aa8.42□□□□□ -1.06
LSR1LSR1 ARR1Q06596 294 aa8.42□□□□□ -1.06
LSR1LSR1 TSR2Q06672 205 aaKnown RBP8.42□□□□□ -1.06
LSR1LSR1 YLL007CQ07799 665 aa8.42□□□□□ -1.06
LSR1LSR1 YDR056CQ12025 205 aa8.42□□□□□ -1.06
LSR1LSR1 MHF1Q3E835 90 aa8.42□□□□□ -1.06
LSR1LSR1 YCL012CQ8J0M4 134 aa8.42□□□□□ -1.06
LSR1LSR1 TY4B-PA0A0B7P3V8 1104 aa8.41□□□□□ -1.06
LSR1LSR1 PRI2P20457 528 aa8.41□□□□□ -1.06
LSR1LSR1 DAL81P21657 970 aa8.41□□□□□ -1.06
LSR1LSR1 PRP19P32523 503 aaKnown RBP8.41□□□□□ -1.06
LSR1LSR1 FMP23P38231 175 aa8.41□□□□□ -1.06
LSR1LSR1 BMT2P38278 337 aa8.41□□□□□ -1.06
LSR1LSR1 TSL1P38427 1098 aaKnown RBP8.41□□□□□ -1.06
LSR1LSR1 YHR020WP38708 688 aaKnown RBP8.41□□□□□ -1.06
LSR1LSR1 UBA4P38820 440 aa8.41□□□□□ -1.06
LSR1LSR1 YEL020CP39994 560 aa8.41□□□□□ -1.06
LSR1LSR1 UTP18P40362 594 aaPredicted RBP8.41□□□□□ -1.06
LSR1LSR1 EFM3P47163 339 aa8.41□□□□□ -1.06
LSR1LSR1 SPC105P53148 917 aa8.41□□□□□ -1.06
LSR1LSR1 TWF1P53250 332 aa8.41□□□□□ -1.06
LSR1LSR1 IRC15Q02733 499 aa8.41□□□□□ -1.06
LSR1LSR1 PNG1Q02890 363 aa8.41□□□□□ -1.06
LSR1LSR1 YMR206WQ03695 313 aa8.41□□□□□ -1.06
LSR1LSR1 PPN1Q04119 674 aa8.41□□□□□ -1.06
LSR1LSR1 YPR114WQ06107 315 aa8.41□□□□□ -1.06
LSR1LSR1 SWA2Q06677 668 aa8.41□□□□□ -1.06
LSR1LSR1 FLC1Q08967 793 aa8.41□□□□□ -1.06
LSR1LSR1 SRF1Q12516 437 aa8.41□□□□□ -1.06
LSR1LSR1 RPN13O13563 156 aa8.4□□□□□ -1.06
LSR1LSR1 CDC31P06704 161 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 LEU1P07264 779 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 ENA1P13587 1091 aa8.4□□□□□ -1.06
LSR1LSR1 MTF1P14908 341 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 DCW1P36091 449 aa8.4□□□□□ -1.06
LSR1LSR1 SOL2P37262 315 aa8.4□□□□□ -1.06
LSR1LSR1 YCR087C-AP37263 153 aa8.4□□□□□ -1.06
LSR1LSR1 RCK1P38622 512 aa8.4□□□□□ -1.06
LSR1LSR1 YHR112CP38716 378 aa8.4□□□□□ -1.06
LSR1LSR1 MNN9P39107 395 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 DLD3P39976 496 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 JLP2P40206 208 aa8.4□□□□□ -1.06
LSR1LSR1 YIR016WP40572 265 aa8.4□□□□□ -1.06
LSR1LSR1 GYP8P43570 497 aa8.4□□□□□ -1.06
LSR1LSR1 YJR124CP47159 448 aa8.4□□□□□ -1.06
LSR1LSR1 SNF12P53628 566 aa8.4□□□□□ -1.06
LSR1LSR1 VAC7P53950 1165 aa8.4□□□□□ -1.06
LSR1LSR1 COG5P53951 403 aa8.4□□□□□ -1.06
LSR1LSR1 NPL3Q01560 414 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
LSR1LSR1 ENA2Q01896 1091 aa8.4□□□□□ -1.06
LSR1LSR1 GRX5Q02784 150 aa8.4□□□□□ -1.06
LSR1LSR1 MET31Q03081 177 aa8.4□□□□□ -1.06
LSR1LSR1 PLP1Q04004 230 aa8.4□□□□□ -1.06
LSR1LSR1 BSC2Q05611 235 aa8.4□□□□□ -1.06
LSR1LSR1 BRE4Q07660 1125 aa8.4□□□□□ -1.06
LSR1LSR1 MED2Q12124 431 aa8.4□□□□□ -1.06
LSR1LSR1 YPL245WQ12179 454 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 PST2Q12335 198 aaKnown RBP8.4□□□□□ -1.06
LSR1LSR1 YOR012WQ12351 137 aa8.4□□□□□ -1.06
LSR1LSR1 NOP56Q12460 504 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
LSR1LSR1 ENA5Q12691 1091 aa8.4□□□□□ -1.06
LSR1LSR1 Q0010Q9ZZX9 128 aa8.4□□□□□ -1.06
LSR1LSR1 HTA1P04911 132 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 STE3P06783 470 aa8.39□□□□□ -1.07
LSR1LSR1 PUT2P07275 575 aa8.39□□□□□ -1.07
LSR1LSR1 MSF1P08425 469 aa8.39□□□□□ -1.07
LSR1LSR1 KAR1P11927 433 aa8.39□□□□□ -1.07
LSR1LSR1 MET8P15807 274 aa8.39□□□□□ -1.07
LSR1LSR1 PDE1P22434 369 aa8.39□□□□□ -1.07
LSR1LSR1 MNE1P24720 663 aa8.39□□□□□ -1.07
LSR1LSR1 SBA1P28707 216 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 SEC17P32602 292 aa8.39□□□□□ -1.07
LSR1LSR1 PRP18P33411 251 aaPredicted RBP8.39□□□□□ -1.07
LSR1LSR1 EMC3P36039 253 aa8.39□□□□□ -1.07
LSR1LSR1 ATG7P38862 630 aa8.39□□□□□ -1.07
LSR1LSR1 EXO1P39875 702 aa8.39□□□□□ -1.07
LSR1LSR1 RPH1P39956 796 aa8.39□□□□□ -1.07
LSR1LSR1 TPA1P40032 644 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 PRE6P40303 254 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 YIL161WP40449 235 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 SER33P40510 469 aa8.39□□□□□ -1.07
LSR1LSR1 AIM22P47051 409 aa8.39□□□□□ -1.07
LSR1LSR1 GPI8P49018 411 aa8.39□□□□□ -1.07
LSR1LSR1 IMD3P50095 523 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 FOL2P51601 243 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 YPL014WQ02606 381 aa8.39□□□□□ -1.07
LSR1LSR1 RRN5Q02983 363 aa8.39□□□□□ -1.07
LSR1LSR1 MRX10Q05648 414 aa8.39□□□□□ -1.07
LSR1LSR1 DBP9Q06218 594 aaKnown RBP8.39□□□□□ -1.07
LSR1LSR1 YPL191CQ08930 360 aa8.39□□□□□ -1.07
LSR1LSR1 MCD1Q12158 566 aa8.39□□□□□ -1.07
LSR1LSR1 YGK3Q12222 375 aaPredicted RBP8.39□□□□□ -1.07
LSR1LSR1 YDL199CQ12407 687 aa8.39□□□□□ -1.07
LSR1LSR1 NSI1Q12457 570 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms