RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RRP36Q96EU6 259 aaKnown RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 LZTS2Q9BRK4 669 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 ESYT1Q9BSJ8 1104 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 MTA3Q9BTC8 594 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 TTYH1Q9H313 450 aaPredicted RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
SNX6-205ENST00000555648 LRRC37A2A6NM11 1700 aa17.86■□□□□ 0.45
SNX6-205ENST00000555648 PFKMP08237 780 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 ANTXR2P58335 489 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 ARHGAP1Q07960 439 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 BFSP2Q13515 415 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 RAB30Q15771 203 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 ZNF654Q8IZM8 581 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 CCDC155Q8N6L0 562 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 MYLIPQ8WY64 445 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 CUL5Q93034 780 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 SCLYQ96I15 445 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 TMEM87BQ96K49 555 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 KATNAL1Q9BW62 490 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 ZNF576Q9H609 170 aa17.85■□□□□ 0.45
SNX6-205ENST00000555648 DLL1O00548 723 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 OPLAHO14841 1288 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 ACTN1P12814 892 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 GHRHRQ02643 423 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 MAFAQ8NHW3 353 aaPredicted RBP17.84■□□□□ 0.45
SNX6-205ENST00000555648 PPP1R13LQ8WUF5 828 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
SNX6-205ENST00000555648 WNT8AQ9H1J5 351 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 SZT2Q5T011 3432 aa17.84■□□□□ 0.45
SNX6-205ENST00000555648 GRXCR1A8MXD5 290 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 SLC27A2O14975 620 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 CYTH3O43739 400 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 CALM1P0DP23 149 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 CALM2P0DP24 149 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 CALM3P0DP25 149 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 RFC2P35250 354 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 PGM5Q15124 567 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 PTGISQ16647 500 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 RASIP1Q5U651 963 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 VSIG10LQ86VR7 867 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 PPTC7Q8NI37 304 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 EMID1Q96A84 441 aaPredicted RBP17.83■□□□□ 0.44
SNX6-205ENST00000555648 MYL10Q9BUA6 226 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 PBX4Q9BYU1 374 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 FTOQ9C0B1 505 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNX6-205ENST00000555648 LAMA3Q16787 3333 aa17.83■□□□□ 0.44
SNX6-205ENST00000555648 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 TGFB3P10600 412 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 SPATA33Q96N06 139 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 GAS2L1Q99501 681 aaPredicted RBP17.82■□□□□ 0.44
SNX6-205ENST00000555648 ALG1Q9BT22 464 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
SNX6-205ENST00000555648 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 LCTP09848 1927 aa17.82■□□□□ 0.44
SNX6-205ENST00000555648 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
SNX6-205ENST00000555648 SORBS3O60504 671 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 GGPS1O95749 300 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 SMARCA1P28370 1054 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 PBX2P40425 430 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 PSEN2P49810 448 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 GRIN2CQ14957 1233 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.81■□□□□ 0.44
SNX6-205ENST00000555648 SLC28A3Q9HAS3 691 aa17.81■□□□□ 0.44
SNX6-205ENST00000555648 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
SNX6-205ENST00000555648 STAM2O75886 525 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 IQCF3P0C7M6 154 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 LIFRP42702 1097 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 MFSD10Q14728 455 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 CELF3Q5SZQ8 465 aaKnown RBP17.8■□□□□ 0.44
SNX6-205ENST00000555648 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
SNX6-205ENST00000555648 PPFIA4O75335 1185 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 ZNF286BP0CG31 522 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 ATP2A2P16615 1042 aaKnown RBP17.79■□□□□ 0.44
SNX6-205ENST00000555648 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 KIAA0753Q2KHM9 967 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 MYSM1Q5VVJ2 828 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 IL31RAQ8NI17 732 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 KAT2BQ92831 832 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 ZFP91Q96JP5 570 aaPredicted RBP17.79■□□□□ 0.44
SNX6-205ENST00000555648 NKX2-4Q9H2Z4 354 aa17.79■□□□□ 0.44
SNX6-205ENST00000555648 RXRAP19793 462 aa17.78■□□□□ 0.44
SNX6-205ENST00000555648 UBA1P22314 1058 aaKnown RBP17.78■□□□□ 0.44
SNX6-205ENST00000555648 NEDD9Q14511 834 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms