RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ADAMTS4O75173 837 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 BAG4O95429 457 aaKnown RBP14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 PGK1P00558 417 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 KRT2P35908 639 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 ACVR2BQ13705 512 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 SNX17Q15036 470 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 ARMCX2Q7L311 632 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 FBXO11Q86XK2 927 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 DIS3L2Q8IYB7 885 aaKnown RBP14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 LENG1Q96BZ8 264 aaPredicted RBP14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 ABHD16BQ9H3Z7 469 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 C6orf50Q9HD87 102 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 PHF24Q9UPV7 400 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 ADCY6O43306 1168 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 GNA11P29992 359 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 MAGEA10P43363 369 aaPredicted RBP14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 RTP1P59025 263 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 FOXD4L6Q3SYB3 417 aaPredicted RBP14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 C1orf53Q5VUE5 145 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 CCSAPQ6IQ19 270 aaPredicted RBP14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 FOXD4L3Q6VB84 417 aaPredicted RBP14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 KLHDC9Q8NEP7 349 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 FERMT2Q96AC1 680 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 ZNF396Q96N95 335 aaPredicted RBP14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 AMNQ9BXJ7 453 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 CCPG1Q9ULG6 757 aa14.5□□□□□ -0.09
SSSCA1-203ENST00000526877 ESYT2A0FGR8 921 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 SMCO2A6NFE2 343 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 BTBD18B2RXH4 712 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 DUSP11O75319 330 aaKnown RBP14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 U2AF2P26368 475 aaKnown RBP eCLIP14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 CCDC144BQ3MJ40 725 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 ATL3Q6DD88 541 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 RNF180Q86T96 592 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 BICD2Q8TD16 824 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 PURBQ96QR8 312 aaKnown RBP14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 ZMYND12Q9H0C1 365 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 GLT8D2Q9H1C3 349 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 ZHX1Q9UKY1 873 aaPredicted RBP14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 PNMA2Q9UL42 364 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 PCDHA4Q9UN74 947 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 PCDHA1Q9Y5I3 950 aa14.49□□□□□ -0.09
SSSCA1-203ENST00000526877 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 NFIBO00712 420 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 KRT85P78386 507 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 IRX5P78411 483 aaPredicted RBP14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 NOSTRINQ8IVI9 506 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 DAGLBQ8NCG7 672 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 MORC4Q8TE76 937 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 TSEN34Q9BSV6 310 aaKnown RBP14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 UPF3AQ9H1J1 476 aaKnown RBP14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 CFAP45Q9UL16 551 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 DDX49Q9Y6V7 483 aaKnown RBP14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 SZT2Q5T011 3432 aa14.48□□□□□ -0.09
SSSCA1-203ENST00000526877 MYADML2A6NDP7 307 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 ASB14A6NK59 587 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 SOX1O00570 391 aaPredicted RBP14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 CTAGE5O15320 804 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 PPP1R11O60927 126 aaPredicted RBP14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 PTMSP20962 102 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 MCM4P33991 863 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 ADCY7P51828 1080 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 MRPL12P52815 198 aaKnown RBP14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 NKX3-2P78367 333 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 DNM1Q05193 864 aaKnown RBP14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 BAATQ14032 418 aaPredicted RBP14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 TRIM60Q495X7 471 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 NSMFQ6X4W1 530 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 CUL5Q93034 780 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 ATP11BQ9Y2G3 1177 aa14.47□□□□□ -0.09
SSSCA1-203ENST00000526877 LTBP2Q14767 1821 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 A0A1W2PQY0 241 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 CST5P28325 142 aaPredicted RBP14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 ACLYP53396 1101 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 GJA9P57773 515 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 NR5A1Q13285 461 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 NFKBIBQ15653 356 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 KCNA10Q16322 511 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 USH1GQ495M9 461 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 MYSM1Q5VVJ2 828 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 TAPT1Q6NXT6 567 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 FAM173BQ6P4H8 233 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 OXER1Q8TDS5 423 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 RIC8AQ9NPQ8 531 aa14.46□□□□□ -0.09
SSSCA1-203ENST00000526877 NOL7Q9UMY1 257 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms