RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SLC7A3Q8WY07 619 aa21.3■■□□□ 1
CCM2-214ENST00000481194 TRIM6Q9C030 488 aaPredicted RBP21.3■■□□□ 1
CCM2-214ENST00000481194 SEPT9Q9UHD8 586 aaPredicted RBP21.3■■□□□ 1
CCM2-214ENST00000481194 ZNF215Q9UL58 517 aaPredicted RBP21.3■■□□□ 1
CCM2-214ENST00000481194 NEBLO76041 1014 aa21.3■■□□□ 1
CCM2-214ENST00000481194 XRCC5P13010 732 aaKnown RBP21.3■■□□□ 1
CCM2-214ENST00000481194 PLCG1P19174 1290 aa21.3■■□□□ 1
CCM2-214ENST00000481194 LIG4P49917 911 aa21.3■■□□□ 1
CCM2-214ENST00000481194 TUBB4BP68371 445 aa21.3■■□□□ 1
CCM2-214ENST00000481194 LDHDQ86WU2 507 aa21.3■■□□□ 1
CCM2-214ENST00000481194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
CCM2-214ENST00000481194 FAM167AQ96KS9 214 aa21.3■■□□□ 1
CCM2-214ENST00000481194 TMEM39BQ9GZU3 492 aa21.3■■□□□ 1
CCM2-214ENST00000481194 ZSWIM4Q9H7M6 989 aa21.3■■□□□ 1
CCM2-214ENST00000481194 TMEM206Q9H813 350 aa21.3■■□□□ 1
CCM2-214ENST00000481194 LTBP4Q8N2S1 1624 aa21.3■■□□□ 1
CCM2-214ENST00000481194 ATP2C1P98194 919 aaPredicted RBP21.3■■□□□ 1
CCM2-214ENST00000481194 MTMR1Q13613 665 aa21.3■■□□□ 1
CCM2-214ENST00000481194 SPECC1LQ69YQ0 1117 aa21.3■■□□□ 1
CCM2-214ENST00000481194 DAGLBQ8NCG7 672 aa21.3■■□□□ 1
CCM2-214ENST00000481194 PAGE5Q96GU1 130 aa21.3■■□□□ 1
CCM2-214ENST00000481194 MRFAP1L1Q96HT8 127 aa21.3■■□□□ 1
CCM2-214ENST00000481194 SELENOOQ9BVL4 669 aa21.3■■□□□ 1
CCM2-214ENST00000481194 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
CCM2-214ENST00000481194 GMCL1P1Q8NEA9 526 aa21.29■■□□□ 1
CCM2-214ENST00000481194 SNAPC2Q13487 334 aa21.29■■□□□ 1
CCM2-214ENST00000481194 UTP14CQ5TAP6 766 aaKnown RBP21.29■■□□□ 1
CCM2-214ENST00000481194 TRMT44Q8IYL2 757 aaKnown RBP21.29■■□□□ 1
CCM2-214ENST00000481194 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
CCM2-214ENST00000481194 PLA2G4BP0C869 781 aa21.29■■□□□ 1
CCM2-214ENST00000481194 HARSP12081 509 aaKnown RBP21.29■■□□□ 1
CCM2-214ENST00000481194 EEF1GP26641 437 aaKnown RBP21.29■■□□□ 1
CCM2-214ENST00000481194 STAT3P40763 770 aa21.29■■□□□ 1
CCM2-214ENST00000481194 SYNPO2Q9UMS6 1093 aa21.29■■□□□ 1
CCM2-214ENST00000481194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.29■■□□□ 1
CCM2-214ENST00000481194 AGXT2Q9BYV1 514 aa21.29■■□□□ 1
CCM2-214ENST00000481194 STRCQ7RTU9 1775 aa21.28■■□□□ 1
CCM2-214ENST00000481194 CAP2P40123 477 aa21.28■■□□□ 1
CCM2-214ENST00000481194 ODR4Q5SWX8 454 aa21.28■■□□□ 1
CCM2-214ENST00000481194 ARMCX3Q9UH62 379 aaPredicted RBP21.28■■□□□ 1
CCM2-214ENST00000481194 MAN1B1Q9UKM7 699 aa21.28■■□□□ 1
CCM2-214ENST00000481194 HPS5Q9UPZ3 1129 aa21.28■■□□□ 1
CCM2-214ENST00000481194 KCNV1Q6PIU1 500 aa21.28■■□□□ 1
CCM2-214ENST00000481194 ANKRD13AQ8IZ07 590 aa21.28■■□□□ 1
CCM2-214ENST00000481194 GPC2Q8N158 579 aa21.28■■□□□ 1
CCM2-214ENST00000481194 ZNF526Q8TF50 670 aaPredicted RBP21.28■■□□□ 1
CCM2-214ENST00000481194 ACCSQ96QU6 501 aa21.28■■□□□ 1
CCM2-214ENST00000481194 CPVLQ9H3G5 476 aa21.28■■□□□ 1
CCM2-214ENST00000481194 CDC25BP30305 580 aa21.28■■□□□ 1
CCM2-214ENST00000481194 SNX16P57768 344 aa21.28■■□□□ 1
CCM2-214ENST00000481194 C9orf131Q5VYM1 1079 aa21.28■■□□□ 1
CCM2-214ENST00000481194 RWDD2AQ9UIY3 292 aa21.28■■□□□ 1
CCM2-214ENST00000481194 HMGCS2P54868 508 aa21.28■■□□□ 1
CCM2-214ENST00000481194 EVCP57679 992 aa21.28■■□□□ 1
CCM2-214ENST00000481194 SLC9C1Q4G0N8 1177 aa21.28■■□□□ 1
CCM2-214ENST00000481194 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
CCM2-214ENST00000481194 PDCL2Q8N4E4 241 aa21.27■■□□□ 1
CCM2-214ENST00000481194 USP17L6PQ6QN14 398 aa21.27■■□□□ 1
CCM2-214ENST00000481194 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
CCM2-214ENST00000481194 SAMD7Q7Z3H4 446 aa21.27■■□□□ 1
CCM2-214ENST00000481194 P2RX5Q93086 422 aa21.27■■□□□ 1
CCM2-214ENST00000481194 PRM3Q9NNZ6 103 aa21.27■■□□□ 1
CCM2-214ENST00000481194 SLC39A2Q9NP94 309 aa21.27■■□□□ 1
CCM2-214ENST00000481194 GOLGA6L10A0A0M3HER8 536 aa21.27■■□□□ 1
CCM2-214ENST00000481194 WDR64B1ANS9 1081 aa21.27■■□□□ 1
CCM2-214ENST00000481194 STXBP3O00186 592 aa21.27■■□□□ 1
CCM2-214ENST00000481194 TBX3O15119 743 aa21.27■■□□□ 1
CCM2-214ENST00000481194 P4HA1P13674 534 aa21.27■■□□□ 1
CCM2-214ENST00000481194 JADE2Q9NQC1 790 aa21.27■■□□□ 1
CCM2-214ENST00000481194 MAD2L2Q9UI95 211 aa21.27■■□□□ 1
CCM2-214ENST00000481194 TROAPQ12815 778 aa21.27■■□□□ 1
CCM2-214ENST00000481194 NEDD9Q14511 834 aa21.27■■□□□ 1
CCM2-214ENST00000481194 METTL13Q8N6R0 699 aa21.27■■□□□ 1
CCM2-214ENST00000481194 FERMT1Q9BQL6 677 aa21.27■■□□□ 1
CCM2-214ENST00000481194 TEX13BQ9BXU2 312 aa21.27■■□□□ 1
CCM2-214ENST00000481194 VIL1P09327 827 aaKnown RBP21.26■□□□□ 0.99
CCM2-214ENST00000481194 ADPGKQ9BRR6 497 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 ELP3Q9H9T3 547 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 PRR12Q9ULL5 1215 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 LAMB4A4D0S4 1761 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 CTAGE9A4FU28 777 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 ARID5AQ03989 594 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.26■□□□□ 0.99
CCM2-214ENST00000481194 GJB4Q9NTQ9 266 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 MMP19Q99542 508 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 FAM184BQ9ULE4 1060 aa21.26■□□□□ 0.99
CCM2-214ENST00000481194 ARHGAP6O43182 974 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 PDIA5Q14554 519 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 SEC23AQ15436 765 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 TAF6LQ9Y6J9 622 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 KIF28PB7ZC32 967 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 TNFAIP3P21580 790 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 GUCY1A2P33402 732 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 XRRA1Q6P2D8 792 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 RSPH3Q86UC2 560 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 KCTD17Q8N5Z5 321 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 ZMYND12Q9H0C1 365 aa21.25■□□□□ 0.99
CCM2-214ENST00000481194 MAP3K20Q9NYL2 800 aaKnown RBP21.25■□□□□ 0.99
CCM2-214ENST00000481194 ZDHHC9Q9Y397 364 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms