RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TRDNQ13061 729 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 PTGISQ16647 500 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 DEFB128Q7Z7B8 93 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 ASB2Q96Q27 587 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 AMNQ9BXJ7 453 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPRE-203ENST00000442830 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 CHD7Q9P2D1 2997 aa16.08■□□□□ 0.16
PTPRE-203ENST00000442830 POU3F3P20264 500 aaPredicted RBP16.07■□□□□ 0.16
PTPRE-203ENST00000442830 KCNJ6P48051 423 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 RBL2Q08999 1139 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 AFG1LQ8WV93 481 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 PPM1EQ8WY54 764 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 COPS5Q92905 334 aa16.07■□□□□ 0.16
PTPRE-203ENST00000442830 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 ARIH2O95376 493 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 HSD17B4P51659 736 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 RABGGTBP53611 331 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 ARHGAP1Q07960 439 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 SEPT14Q6ZU15 432 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 TAAR1Q96RJ0 339 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 MRVI1Q9Y6F6 885 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 MUC3AQ02505 3323 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 TRANK1O15050 2925 aa16.06■□□□□ 0.16
PTPRE-203ENST00000442830 ERICH2A1L162 156 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 CFBP00751 764 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 NR3C2P08235 984 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 TGFB3P10600 412 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 SELPP16109 830 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
PTPRE-203ENST00000442830 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 VWCEQ96DN2 955 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
PTPRE-203ENST00000442830 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 ZBTB5O15062 677 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 CA3P07451 260 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 EIF2AK2P19525 551 aaKnown RBP16.04■□□□□ 0.16
PTPRE-203ENST00000442830 CNKSR3Q6P9H4 555 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 LRRC8DQ7L1W4 858 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 DHX37Q8IY37 1157 aaKnown RBP16.04■□□□□ 0.16
PTPRE-203ENST00000442830 MTMR8Q96EF0 704 aa16.04■□□□□ 0.16
PTPRE-203ENST00000442830 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
PTPRE-203ENST00000442830 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
PTPRE-203ENST00000442830 PRRC2BQ5JSZ5 2229 aaKnown RBP16.04■□□□□ 0.16
PTPRE-203ENST00000442830 EMSYQ7Z589 1322 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 STAM2O75886 525 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 F2P00734 622 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
PTPRE-203ENST00000442830 CHMP4BP1P59074 171 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
PTPRE-203ENST00000442830 PTK7Q13308 1070 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 CCDC85BQ15834 202 aaPredicted RBP16.03■□□□□ 0.16
PTPRE-203ENST00000442830 GDF6Q6KF10 455 aaPredicted RBP16.03■□□□□ 0.16
PTPRE-203ENST00000442830 STOX1Q6ZVD7 989 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 ADAMTS19Q8TE59 1207 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 COG5Q9UP83 839 aa16.03■□□□□ 0.16
PTPRE-203ENST00000442830 ABHD14A-ACY1A0A1B0GW23 586 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 TLL1O43897 1013 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 CXCL10P02778 98 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 PSEN2P49810 448 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 MFSD10Q14728 455 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 SEC23AQ15436 765 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 CHST3Q7LGC8 479 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 KAT2BQ92831 832 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 UHRF1Q96T88 793 aaPredicted RBP16.02■□□□□ 0.16
PTPRE-203ENST00000442830 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 LMCD1Q9NZU5 365 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 PCDHA1Q9Y5I3 950 aa16.02■□□□□ 0.16
PTPRE-203ENST00000442830 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
PTPRE-203ENST00000442830 GCOM1H8Y6P7 765 aaPredicted RBP16.01■□□□□ 0.15
PTPRE-203ENST00000442830 HAS3O00219 553 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 IGHDP01880 384 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 POLR2MP0CAP2 368 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 MYOGP15173 224 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 CCND2P30279 289 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 KIAA0753Q2KHM9 967 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
PTPRE-203ENST00000442830 MICALL1Q8N3F8 863 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 ZBED2Q9BTP6 218 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 PTPRSQ13332 1948 aa16.01■□□□□ 0.15
PTPRE-203ENST00000442830 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
PTPRE-203ENST00000442830 CKBP12277 381 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms