RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Ctnna1P26231 906 aaKnown RBP16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ighmbp2P40694 993 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ccdc68Q8BVC4 333 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Snx19Q6P4T1 997 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ctdspl2Q8BG15 465 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cbwd1Q8VEH6 393 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cuedc2Q9CXX9 284 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Col1a2Q01149 1372 aa16.49■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Hspa1lP16627 641 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Rbm12b2Q66JV4 834 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Nol6Q8R5K4 1152 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ces1Q8VCC2 565 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 AticQ9CWJ9 592 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Dach1Q9QYB2 751 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gm14525B1AZA0 212 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gm2012B1B0R1 212 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Pkp1P97350 728 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gm14819Q62478 212 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Olfr1415Q7TQS4 311 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Pspc1Q8R326 523 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Olfr1416Q8VGU4 312 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Krt5Q922U2 580 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cacna2d3Q9Z1L5 1091 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 LrmpQ60664 539 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Fam196bQ6GQV1 535 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Nr2e3Q9QXZ7 395 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Alox15P39654 663 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Srrm1Q52KI8 946 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Kbtbd3Q8BHI4 607 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Eif3cQ8R1B4 911 aaKnown RBP16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Lrch2Q3UMG5 773 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Baiap3Q80TT2 1134 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gbp5Q8CFB4 590 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Snrnp35Q9D384 244 aa16.48■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gm5483B2RV77 97 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cnga4Q3UW12 575 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Slc8a2Q8K596 921 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Elmsan1E9Q2I4 1089 aaKnown RBP16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ptgs1P22437 602 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Spc25Q3UA16 226 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gys2Q8VCB3 704 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ola1Q9CZ30 396 aaKnown RBP16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Trim37Q6PCX9 961 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Brd2Q7JJ13 798 aaKnown RBP16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Desi2Q9D291 194 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Abcc3B2RX12 1523 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cyp3a57D3YYZ0 503 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ranbp1P34022 203 aaKnown RBP16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Xxylt1Q3U4G3 392 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Rrp15Q9CYX7 281 aaKnown RBP16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Dnaaf1Q9D2H9 634 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Slc12a1P55014 1095 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 TbcbQ9D1E6 244 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Rlbp1Q9Z275 317 aa16.47■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Nom1Q3UFM5 854 aaKnown RBP16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ppfia2Q8BSS9 1257 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Olfr390Q8VEZ7 311 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Fuca2Q99KR8 461 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cdk5rap3Q99LM2 503 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Plekhg1F6S200 1446 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Lmtk2Q3TYD6 1471 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Zfp94E9Q6Y4 486 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ushbp1Q8R370 680 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Ehd4Q9EQP2 541 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Vmn2r78K7N6U5 853 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 DffaO54786 331 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Serpinb3dQ6UKZ0 387 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Atp1a1Q8VDN2 1023 aaKnown RBP16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Krt17Q9QWL7 433 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Col15a1O35206 1367 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Vwa3bJ9JI28 736 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Pde6aP27664 859 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Rnf40Q3U319 1001 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Nxf7Q80SZ6 620 aaKnown RBP16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Cabcoco1Q8CDT7 208 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Sucla2Q9Z2I9 463 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Rab20P35295 233 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Taf1bP97358 586 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 MmeQ61391 750 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gnl3Q8CI11 538 aaKnown RBP16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Caln1Q9JJG7 219 aa16.46■□□□□ 0.23
Ccdc50-203ENSMUST00000100026 Gm2237E9Q501 211 aa16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Gm3591K7N6X2 186 aa16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Actn3O88990 900 aaKnown RBP16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Zhx1P70121 873 aa16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Cep126Q0VBV7 1103 aa16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Scfd1Q8BRF7 639 aaKnown RBP16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 4921524L21RikQ9D5T2 438 aa16.46■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Magi3Q9EQJ9 1476 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Dync1i1O88485 628 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Pou5f1P20263 352 aaKnown RBP16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 CstaP56567 97 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Tbc1d30Q69ZT9 766 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 RpgrQ9R0X5 1001 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Abca5Q8K448 1642 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Ppp1r12cQ3UMT1 782 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 NptxrQ99J85 493 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Eef1gQ9D8N0 437 aaKnown RBP16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Trim54Q9ERP3 366 aa16.45■□□□□ 0.22
Ccdc50-203ENSMUST00000100026 Timm44O35857 452 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms