Protein–RNA interactions for Protein: Q9CXX9

Cuedc2, CUE domain-containing protein 2, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc2Q9CXX9 Gm25239-201ENSMUST00000174915 86 ntBASIC37.81■■■■□ 3.64
Cuedc2Q9CXX9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Cuedc2Q9CXX9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Cuedc2Q9CXX9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Cuedc2Q9CXX9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
Cuedc2Q9CXX9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Cuedc2Q9CXX9 Gm15042-201ENSMUST00000120212 883 ntBASIC33.57■■■□□ 2.96
Cuedc2Q9CXX9 Psd-208ENSMUST00000224556 2034 ntBASIC33.35■■■□□ 2.93
Cuedc2Q9CXX9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Cuedc2Q9CXX9 Gm15045-201ENSMUST00000117359 883 ntBASIC32.97■■■□□ 2.87
Cuedc2Q9CXX9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cuedc2Q9CXX9 Gm24109-201ENSMUST00000175489 103 ntBASIC32.54■■■□□ 2.8
Cuedc2Q9CXX9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Cuedc2Q9CXX9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.45■■■□□ 2.78
Cuedc2Q9CXX9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Cuedc2Q9CXX9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cuedc2Q9CXX9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cuedc2Q9CXX9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cuedc2Q9CXX9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cuedc2Q9CXX9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cuedc2Q9CXX9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cuedc2Q9CXX9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cuedc2Q9CXX9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cuedc2Q9CXX9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cuedc2Q9CXX9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cuedc2Q9CXX9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cuedc2Q9CXX9 Gm23366-201ENSMUST00000175022 89 ntBASIC31.58■■■□□ 2.65
Cuedc2Q9CXX9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.53■■■□□ 2.64
Cuedc2Q9CXX9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cuedc2Q9CXX9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cuedc2Q9CXX9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Cuedc2Q9CXX9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cuedc2Q9CXX9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cuedc2Q9CXX9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cuedc2Q9CXX9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.2■■■□□ 2.59
Cuedc2Q9CXX9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cuedc2Q9CXX9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cuedc2Q9CXX9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cuedc2Q9CXX9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cuedc2Q9CXX9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Cuedc2Q9CXX9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.86■■■□□ 2.53
Cuedc2Q9CXX9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Cuedc2Q9CXX9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cuedc2Q9CXX9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Cuedc2Q9CXX9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.58■■■□□ 2.49
Cuedc2Q9CXX9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.54■■■□□ 2.48
Cuedc2Q9CXX9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cuedc2Q9CXX9 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.38■■■□□ 2.45
Cuedc2Q9CXX9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cuedc2Q9CXX9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cuedc2Q9CXX9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cuedc2Q9CXX9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.11■■■□□ 2.41
Cuedc2Q9CXX9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cuedc2Q9CXX9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cuedc2Q9CXX9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Cuedc2Q9CXX9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Cuedc2Q9CXX9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.84■■■□□ 2.37
Cuedc2Q9CXX9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cuedc2Q9CXX9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.79■■■□□ 2.36
Cuedc2Q9CXX9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Cuedc2Q9CXX9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Cuedc2Q9CXX9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Cuedc2Q9CXX9 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.71■■■□□ 2.35
Cuedc2Q9CXX9 Gm25238-201ENSMUST00000174914 89 ntBASIC29.68■■■□□ 2.34
Cuedc2Q9CXX9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
Cuedc2Q9CXX9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
Cuedc2Q9CXX9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Cuedc2Q9CXX9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Cuedc2Q9CXX9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Cuedc2Q9CXX9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cuedc2Q9CXX9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Cuedc2Q9CXX9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.52■■■□□ 2.32
Cuedc2Q9CXX9 Gm27325-201ENSMUST00000175467 74 ntBASIC29.52■■■□□ 2.32
Cuedc2Q9CXX9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Cuedc2Q9CXX9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.47■■■□□ 2.31
Cuedc2Q9CXX9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Cuedc2Q9CXX9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cuedc2Q9CXX9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Cuedc2Q9CXX9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Cuedc2Q9CXX9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cuedc2Q9CXX9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cuedc2Q9CXX9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.28■■■□□ 2.28
Cuedc2Q9CXX9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cuedc2Q9CXX9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Cuedc2Q9CXX9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Cuedc2Q9CXX9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cuedc2Q9CXX9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cuedc2Q9CXX9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Cuedc2Q9CXX9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cuedc2Q9CXX9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Cuedc2Q9CXX9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
Cuedc2Q9CXX9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Cuedc2Q9CXX9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cuedc2Q9CXX9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cuedc2Q9CXX9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Cuedc2Q9CXX9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.9■■■□□ 2.22
Cuedc2Q9CXX9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cuedc2Q9CXX9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cuedc2Q9CXX9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cuedc2Q9CXX9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms