RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W OPT2Q06593 877 aa5.71□□□□□ -1.5
RPN7YPR108W RSC3Q06639 885 aa5.71□□□□□ -1.5
RPN7YPR108W RSB1Q08417 382 aa5.71□□□□□ -1.5
RPN7YPR108W YPQ1Q12010 308 aa5.71□□□□□ -1.5
RPN7YPR108W NMD4Q12129 218 aa5.71□□□□□ -1.5
RPN7YPR108W YLR046CQ12253 270 aa5.71□□□□□ -1.5
RPN7YPR108W YVC1Q12324 675 aa5.71□□□□□ -1.5
RPN7YPR108W EPT1P22140 391 aa5.7□□□□□ -1.5
RPN7YPR108W SAN1P22470 610 aa5.7□□□□□ -1.5
RPN7YPR108W GRR1P24814 1151 aa5.7□□□□□ -1.5
RPN7YPR108W GEX1P25596 615 aa5.7□□□□□ -1.5
RPN7YPR108W YJU2P28320 278 aaPredicted RBP5.7□□□□□ -1.5
RPN7YPR108W AIM26P32858 118 aa5.7□□□□□ -1.5
RPN7YPR108W TEF4P36008 412 aaKnown RBP5.7□□□□□ -1.5
RPN7YPR108W YKL151CP36059 337 aa5.7□□□□□ -1.5
RPN7YPR108W GEX2P36173 615 aa5.7□□□□□ -1.5
RPN7YPR108W MRPL17P36528 281 aa5.7□□□□□ -1.5
RPN7YPR108W MUM2P38236 366 aa5.7□□□□□ -1.5
RPN7YPR108W SLM4P38247 162 aa5.7□□□□□ -1.5
RPN7YPR108W SAF1P38352 637 aa5.7□□□□□ -1.5
RPN7YPR108W NEM1P38757 446 aa5.7□□□□□ -1.5
RPN7YPR108W MPT5P39016 859 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
RPN7YPR108W GIM4P40005 111 aaKnown RBP5.7□□□□□ -1.5
RPN7YPR108W RGI1P40043 161 aaPredicted RBP5.7□□□□□ -1.5
RPN7YPR108W MGS1P40151 587 aa5.7□□□□□ -1.5
RPN7YPR108W NDE1P40215 560 aa5.7□□□□□ -1.5
RPN7YPR108W OSW5P40219 148 aa5.7□□□□□ -1.5
RPN7YPR108W GAB1P41733 394 aa5.7□□□□□ -1.5
RPN7YPR108W NUP85P46673 744 aa5.7□□□□□ -1.5
RPN7YPR108W YJR149WP47177 404 aa5.7□□□□□ -1.5
RPN7YPR108W SWC4P53201 476 aa5.7□□□□□ -1.5
RPN7YPR108W SWP1Q02795 286 aa5.7□□□□□ -1.5
RPN7YPR108W NAN1Q02931 896 aaKnown RBP5.7□□□□□ -1.5
RPN7YPR108W GOT1Q03554 138 aa5.7□□□□□ -1.5
RPN7YPR108W TRM12Q04235 462 aa5.7□□□□□ -1.5
RPN7YPR108W EMI2Q04409 500 aaKnown RBP5.7□□□□□ -1.5
RPN7YPR108W GAD1Q04792 585 aa5.7□□□□□ -1.5
RPN7YPR108W BSP1Q06604 576 aa5.7□□□□□ -1.5
RPN7YPR108W MFG1Q07684 458 aa5.7□□□□□ -1.5
RPN7YPR108W YEH2Q07950 538 aa5.7□□□□□ -1.5
RPN7YPR108W HUA2Q12134 243 aa5.7□□□□□ -1.5
RPN7YPR108W MSH5Q12175 901 aa5.7□□□□□ -1.5
RPN7YPR108W PFK27Q12471 397 aaPredicted RBP5.7□□□□□ -1.5
RPN7YPR108W YPL247CQ12523 523 aa5.7□□□□□ -1.5
RPN7YPR108W Q0010Q9ZZX9 128 aa5.7□□□□□ -1.5
RPN7YPR108W CET1O13297 549 aaPredicted RBP5.69□□□□□ -1.5
RPN7YPR108W STE3P06783 470 aa5.69□□□□□ -1.5
RPN7YPR108W SPT3P06844 337 aa5.69□□□□□ -1.5
RPN7YPR108W AMD1P15274 810 aaKnown RBP5.69□□□□□ -1.5
RPN7YPR108W MLS1P30952 554 aa5.69□□□□□ -1.5
RPN7YPR108W SSH4P32343 579 aa5.69□□□□□ -1.5
RPN7YPR108W DOM34P33309 386 aa5.69□□□□□ -1.5
RPN7YPR108W GCS1P35197 352 aa5.69□□□□□ -1.5
RPN7YPR108W THI80P35202 319 aa5.69□□□□□ -1.5
RPN7YPR108W PHO11P35842 467 aa5.69□□□□□ -1.5
RPN7YPR108W PHO12P38693 467 aa5.69□□□□□ -1.5
RPN7YPR108W HSE1P38753 452 aa5.69□□□□□ -1.5
RPN7YPR108W MTG2P38860 518 aa5.69□□□□□ -1.5
RPN7YPR108W PIK1P39104 1066 aa5.69□□□□□ -1.5
RPN7YPR108W MNN9P39107 395 aaKnown RBP5.69□□□□□ -1.5
RPN7YPR108W MPH1P40562 993 aa5.69□□□□□ -1.5
RPN7YPR108W YIR016WP40572 265 aa5.69□□□□□ -1.5
RPN7YPR108W VMA13P41807 478 aaKnown RBP5.69□□□□□ -1.5
RPN7YPR108W OYE3P41816 400 aaPredicted RBP5.69□□□□□ -1.5
RPN7YPR108W GCV1P48015 400 aa5.69□□□□□ -1.5
RPN7YPR108W SDT1P53078 280 aa5.69□□□□□ -1.5
RPN7YPR108W SKI8Q02793 397 aaPredicted RBP5.69□□□□□ -1.5
RPN7YPR108W YMR010WQ03687 405 aa5.69□□□□□ -1.5
RPN7YPR108W ARX1Q03862 593 aaKnown RBP5.69□□□□□ -1.5
RPN7YPR108W YMR034CQ05131 434 aaPredicted RBP5.69□□□□□ -1.5
RPN7YPR108W RRT8Q08219 342 aa5.69□□□□□ -1.5
RPN7YPR108W THP1Q08231 455 aa5.69□□□□□ -1.5
RPN7YPR108W ATG29Q12092 213 aa5.69□□□□□ -1.5
RPN7YPR108W HXK2P04807 486 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W ARG3P05150 338 aa5.68□□□□□ -1.5
RPN7YPR108W SUI3P09064 285 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W RPS4AP0CX35 261 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W RPS4BP0CX36 261 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W SNF4P12904 322 aa5.68□□□□□ -1.5
RPN7YPR108W CNA1P23287 553 aa5.68□□□□□ -1.5
RPN7YPR108W OCA4P25366 362 aa5.68□□□□□ -1.5
RPN7YPR108W VMA6P32366 345 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W PRP21P32524 280 aaPredicted RBP5.68□□□□□ -1.5
RPN7YPR108W UGP1P32861 499 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W SWE1P32944 819 aa5.68□□□□□ -1.5
RPN7YPR108W UTP11P34247 250 aaPredicted RBP5.68□□□□□ -1.5
RPN7YPR108W PTC1P35182 281 aa5.68□□□□□ -1.5
RPN7YPR108W YBR071WP38243 211 aa5.68□□□□□ -1.5
RPN7YPR108W PCL5P38794 229 aa5.68□□□□□ -1.5
RPN7YPR108W YHR218WP38899 603 aa5.68□□□□□ -1.5
RPN7YPR108W DUN1P39009 513 aa5.68□□□□□ -1.5
RPN7YPR108W TPA1P40032 644 aaKnown RBP5.68□□□□□ -1.5
RPN7YPR108W RTT105P40063 208 aa5.68□□□□□ -1.5
RPN7YPR108W FMP10P40098 244 aa5.68□□□□□ -1.5
RPN7YPR108W HPM1P40481 377 aa5.68□□□□□ -1.5
RPN7YPR108W VHR1P40522 640 aa5.68□□□□□ -1.5
RPN7YPR108W FAF1P40546 346 aaPredicted RBP5.68□□□□□ -1.5
RPN7YPR108W IRC5P43610 853 aa5.68□□□□□ -1.5
RPN7YPR108W RMD8P43620 662 aa5.68□□□□□ -1.5
RPN7YPR108W AIM22P47051 409 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 98.8 ms