RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W VMA2P16140 517 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W TYR1P20049 452 aa3.79□□□□□ -1.8
HSH49YOR319W MSP1P28737 362 aa3.79□□□□□ -1.8
HSH49YOR319W BRF1P29056 596 aa3.79□□□□□ -1.8
HSH49YOR319W GYP6P32806 458 aa3.79□□□□□ -1.8
HSH49YOR319W ASK1P35734 292 aa3.79□□□□□ -1.8
HSH49YOR319W ROT2P38138 954 aa3.79□□□□□ -1.8
HSH49YOR319W LAG1P38703 411 aa3.79□□□□□ -1.8
HSH49YOR319W TIF4631P39935 952 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W TOM22P49334 152 aa3.79□□□□□ -1.8
HSH49YOR319W RMD9P53140 646 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W SOL4P53315 255 aa3.79□□□□□ -1.8
HSH49YOR319W RPT4P53549 437 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W SMM1P53720 384 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W YVH1Q02256 364 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W SHR3Q02774 210 aa3.79□□□□□ -1.8
HSH49YOR319W YPL107WQ02873 248 aa3.79□□□□□ -1.8
HSH49YOR319W CTL1Q03220 320 aaKnown RBP3.79□□□□□ -1.8
HSH49YOR319W YMR130WQ04223 302 aa3.79□□□□□ -1.8
HSH49YOR319W UAF30Q08747 228 aa3.79□□□□□ -1.8
HSH49YOR319W RDR1Q08904 546 aa3.79□□□□□ -1.8
HSH49YOR319W VAM3Q12241 283 aa3.79□□□□□ -1.8
HSH49YOR319W RRI1Q12468 440 aa3.79□□□□□ -1.8
HSH49YOR319W FRE6Q12473 712 aa3.79□□□□□ -1.8
HSH49YOR319W EDE1P34216 1381 aa3.78□□□□□ -1.8
HSH49YOR319W YPR089WO13585 888 aa3.78□□□□□ -1.8
HSH49YOR319W LPD1P09624 499 aaKnown RBP3.78□□□□□ -1.8
HSH49YOR319W SPO7P18410 259 aa3.78□□□□□ -1.8
HSH49YOR319W KRE2P27809 442 aa3.78□□□□□ -1.8
HSH49YOR319W MCM4P30665 933 aaKnown RBP3.78□□□□□ -1.8
HSH49YOR319W SNC1P31109 117 aa3.78□□□□□ -1.8
HSH49YOR319W TCM62P38228 572 aaKnown RBP3.78□□□□□ -1.8
HSH49YOR319W MMS4P38257 691 aa3.78□□□□□ -1.8
HSH49YOR319W GDT1P38301 280 aaPredicted RBP3.78□□□□□ -1.8
HSH49YOR319W TOM71P38825 639 aaKnown RBP3.78□□□□□ -1.8
HSH49YOR319W YIL024CP40543 189 aa3.78□□□□□ -1.8
HSH49YOR319W HXT9P40885 567 aa3.78□□□□□ -1.8
HSH49YOR319W YJL132WP47014 750 aa3.78□□□□□ -1.8
HSH49YOR319W DCS1Q06151 350 aa3.78□□□□□ -1.8
HSH49YOR319W YDL218WQ07629 317 aa3.78□□□□□ -1.8
HSH49YOR319W AEP3Q12089 606 aa3.78□□□□□ -1.8
HSH49YOR319W NFI1Q12216 726 aa3.78□□□□□ -1.8
HSH49YOR319W HIF1Q12373 385 aa3.78□□□□□ -1.8
HSH49YOR319W RAD52P06778 471 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W RIP1P08067 215 aa3.77□□□□□ -1.81
HSH49YOR319W RPL1AP0CX43 217 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W RPL1BP0CX44 217 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W SGV1P23293 657 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W HIR2P32480 875 aa3.77□□□□□ -1.81
HSH49YOR319W REC114P32841 428 aa3.77□□□□□ -1.81
HSH49YOR319W RGT1P32862 1170 aa3.77□□□□□ -1.81
HSH49YOR319W MSN2P33748 704 aa3.77□□□□□ -1.81
HSH49YOR319W UIP5P36137 443 aa3.77□□□□□ -1.81
HSH49YOR319W DAD2P36162 133 aa3.77□□□□□ -1.81
HSH49YOR319W VHC1P38329 1120 aa3.77□□□□□ -1.81
HSH49YOR319W SER3P40054 469 aa3.77□□□□□ -1.81
HSH49YOR319W VRG4P40107 337 aa3.77□□□□□ -1.81
HSH49YOR319W CFD1P40558 293 aa3.77□□□□□ -1.81
HSH49YOR319W VPS25P47142 202 aa3.77□□□□□ -1.81
HSH49YOR319W ECM27P47144 725 aa3.77□□□□□ -1.81
HSH49YOR319W ALT2P52892 507 aa3.77□□□□□ -1.81
HSH49YOR319W PKP2P53170 491 aa3.77□□□□□ -1.81
HSH49YOR319W DRN1P53255 507 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W RHO4Q00246 291 aa3.77□□□□□ -1.81
HSH49YOR319W PRP42Q03776 544 aaKnown RBP3.77□□□□□ -1.81
HSH49YOR319W MRPL1Q04599 285 aa3.77□□□□□ -1.81
HSH49YOR319W MTR10Q99189 972 aa3.77□□□□□ -1.81
HSH49YOR319W GAL4P04386 881 aa3.76□□□□□ -1.81
HSH49YOR319W CBP4P37267 147 aa3.76□□□□□ -1.81
HSH49YOR319W DUG2P38149 878 aa3.76□□□□□ -1.81
HSH49YOR319W YMR124WP39523 943 aaKnown RBP3.76□□□□□ -1.81
HSH49YOR319W YMR147WP40218 223 aaKnown RBP3.76□□□□□ -1.81
HSH49YOR319W TFG2P41896 400 aaPredicted RBP3.76□□□□□ -1.81
HSH49YOR319W MEP2P41948 499 aa3.76□□□□□ -1.81
HSH49YOR319W MLC1P53141 149 aa3.76□□□□□ -1.81
HSH49YOR319W ZPR1P53303 486 aaKnown RBP3.76□□□□□ -1.81
HSH49YOR319W BUD32P53323 261 aa3.76□□□□□ -1.81
HSH49YOR319W COP1P53622 1201 aaKnown RBP3.76□□□□□ -1.81
HSH49YOR319W TOF1P53840 1238 aa3.76□□□□□ -1.81
HSH49YOR319W SMA1Q02651 245 aa3.76□□□□□ -1.81
HSH49YOR319W POS5Q06892 414 aa3.76□□□□□ -1.81
HSH49YOR319W SSK1Q07084 712 aa3.76□□□□□ -1.81
HSH49YOR319W RKM1Q08961 583 aaPredicted RBP3.76□□□□□ -1.81
HSH49YOR319W HER1Q12276 1246 aa3.76□□□□□ -1.81
HSH49YOR319W RPL6BP05739 176 aaKnown RBP3.75□□□□□ -1.81
HSH49YOR319W ATP10P18496 279 aa3.75□□□□□ -1.81
HSH49YOR319W PHO84P25297 587 aaKnown RBP3.75□□□□□ -1.81
HSH49YOR319W GEX1P25596 615 aa3.75□□□□□ -1.81
HSH49YOR319W POT1P27796 417 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
HSH49YOR319W BEM1P29366 551 aa3.75□□□□□ -1.81
HSH49YOR319W SIN4P32259 974 aa3.75□□□□□ -1.81
HSH49YOR319W ATP11P32453 318 aa3.75□□□□□ -1.81
HSH49YOR319W LAS1P36146 502 aaPredicted RBP3.75□□□□□ -1.81
HSH49YOR319W EFM2P38347 419 aa3.75□□□□□ -1.81
HSH49YOR319W LEU5P38702 357 aa3.75□□□□□ -1.81
HSH49YOR319W KEL1P38853 1164 aaKnown RBP3.75□□□□□ -1.81
HSH49YOR319W POP2P39008 433 aa3.75□□□□□ -1.81
HSH49YOR319W YER130CP39959 443 aa3.75□□□□□ -1.81
HSH49YOR319W VHS2P40463 436 aa3.75□□□□□ -1.81
HSH49YOR319W RPL6AQ02326 176 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms