RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	VAC14	Q06708	880 aa		4.1	□□□□□ -1.75
YTM1	YOR272W	GSH2	Q08220	491 aa		4.1	□□□□□ -1.75
YTM1	YOR272W	UBX3	Q12229	455 aa		4.1	□□□□□ -1.75
YTM1	YOR272W	HIS3	P06633	220 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	PET494	P07390	489 aa	Predicted RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	YCP4	P25349	247 aa	Known RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	CHS3	P29465	1165 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	YKL050C	P35736	922 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	MUM2	P38236	366 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	DIA4	P38705	446 aa	Predicted RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	YIR016W	P40572	265 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	ZPR1	P53303	486 aa	Known RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	LSC1	P53598	329 aa	Known RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	ECI1	Q05871	280 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	TCO89	Q08921	799 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	SGT2	Q12118	346 aa	Known RBP	4.09	□□□□□ -1.75
YTM1	YOR272W	IES3	Q12345	250 aa		4.09	□□□□□ -1.75
YTM1	YOR272W	RPS19A	P07280	144 aa	Known RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	RPS19B	P07281	144 aa	Predicted RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	RSR1	P13856	272 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	CLB2	P24869	491 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	PAP1	P29468	568 aa	Known RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	HCS1	P34243	683 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
YTM1	YOR272W	PFF1	P38244	976 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	SIP3	P38717	1229 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	PEX18	P38855	283 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	BUR6	P40096	142 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	MET18	P40469	1032 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	EFM4	P40516	257 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	SEC27	P41811	889 aa	Known RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	SGM1	P47166	707 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	YGR266W	P53326	701 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	MPS1	P54199	764 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	SVL3	Q03088	825 aa	Known RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	YMR178W	Q03219	274 aa	Known RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	ARP10	Q04549	284 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	FUS2	Q05670	677 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	DIB1	Q06819	143 aa	Predicted RBP	4.08	□□□□□ -1.76
YTM1	YOR272W	ENT4	Q07872	247 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	YAP7	Q08182	245 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	MSH5	Q12175	901 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	INP53	Q12271	1107 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	YOR111W	Q99210	232 aa		4.08	□□□□□ -1.76
YTM1	YOR272W	YPT1	P01123	206 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	ARG4	P04076	463 aa	Predicted RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	LPD1	P09624	499 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	TPM1	P17536	199 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	VPS1	P21576	704 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	MRE11	P32829	692 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	UTP11	P34247	250 aa	Predicted RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	YKT6	P36015	200 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	AGP2	P38090	596 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	RFT1	P38206	574 aa	Predicted RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	SPP381	P38282	291 aa	Predicted RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	RTS1	P38903	757 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	YHB1	P39676	399 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	GPD2	P41911	440 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	CIK1	Q01649	594 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	YPL068C	Q02749	293 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	DML1	Q03652	475 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	GIR2	Q03768	265 aa	Predicted RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	RAD30	Q04049	632 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	TAF9	Q05027	157 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	HEL2	Q05580	639 aa	Known RBP	4.07	□□□□□ -1.76
YTM1	YOR272W	MCP2	Q06567	569 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	YDL121C	Q07541	149 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	RIM20	Q12033	661 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	YLR112W	Q12130	139 aa		4.07	□□□□□ -1.76
YTM1	YOR272W	PMD1	P32634	1753 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	HKR1	P41809	1802 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	CDC8	P00572	216 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	CDC31	P06704	161 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	SSC1	P0CS90	654 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	REC107	P21651	314 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	VMA16	P23968	213 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	GFD2	P25370	566 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	BUD23	P25627	275 aa	Predicted RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	MCM4	P30665	933 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	NIP1	P32497	812 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	COY1	P34237	679 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	SNU114	P36048	1008 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	YBL029W	P38201	376 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	YBR062C	P38239	180 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	FES1	P38260	290 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	YBR242W	P38331	238 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	YEL068C	P39977	110 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	VRG4	P40107	337 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	TMA108	P40462	946 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	STB2	P46679	850 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	GCD14	P46959	383 aa	Predicted RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	HOP2	P53187	214 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	YTP1	P53584	459 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	SSQ1	Q05931	657 aa	Predicted RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	UTP21	Q06078	939 aa	Predicted RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	VIP1	Q06685	1146 aa	Known RBP	4.06	□□□□□ -1.76
YTM1	YOR272W	NSE1	Q07913	336 aa		4.06	□□□□□ -1.76
YTM1	YOR272W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YTM1	YOR272W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YTM1	YOR272W	RTP1	Q12751	981 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms