RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	ATR1	P13090	542 aa		4.12	□□□□□ -1.75
RPN8	YOR261C	CPR3	P25719	182 aa		4.12	□□□□□ -1.75
RPN8	YOR261C	YMR147W	P40218	223 aa	Known RBP	4.12	□□□□□ -1.75
RPN8	YOR261C	RMD8	P43620	662 aa		4.12	□□□□□ -1.75
RPN8	YOR261C	CAF130	P53280	1122 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN8	YOR261C	RPT6	Q01939	405 aa	Known RBP	4.12	□□□□□ -1.75
RPN8	YOR261C	RKM5	Q12367	367 aa		4.12	□□□□□ -1.75
RPN8	YOR261C	BRR1	Q99177	341 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN8	YOR261C	RPL31B	P0C2H9	113 aa	Known RBP	4.11	□□□□□ -1.75
RPN8	YOR261C	EXO70	P19658	623 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	ATP11	P32453	318 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	CST26	P38226	397 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	TIF5	P38431	405 aa	Known RBP	4.11	□□□□□ -1.75
RPN8	YOR261C	ERP2	P39704	215 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	ALG8	P40351	577 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	TWF1	P53250	332 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	BOR1	P53838	576 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPN8	YOR261C	TAP42	Q04372	366 aa		4.11	□□□□□ -1.75
RPN8	YOR261C	MRD1	Q06106	887 aa	Known RBP	4.11	□□□□□ -1.75
RPN8	YOR261C	MES1	P00958	751 aa	Known RBP	4.1	□□□□□ -1.75
RPN8	YOR261C	SWE1	P32944	819 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	MFT1	P33441	392 aa	Known RBP	4.1	□□□□□ -1.75
RPN8	YOR261C	VID24	P38263	362 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	MET18	P40469	1032 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	IDP2	P41939	412 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	GWT1	P47026	490 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	JJJ1	P53863	590 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	TLG2	Q08144	397 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	CTF3	Q12748	733 aa		4.1	□□□□□ -1.75
RPN8	YOR261C	MRP7	P12687	371 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	BUB3	P26449	341 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	SEC66	P33754	206 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	TUL1	P36096	758 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	SYG1	P40528	902 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	SUB1	P54000	292 aa	Known RBP	4.09	□□□□□ -1.75
RPN8	YOR261C	PDS5	Q04264	1277 aa		4.09	□□□□□ -1.75
RPN8	YOR261C	RNA14	P25298	677 aa	Known RBP	4.08	□□□□□ -1.76
RPN8	YOR261C	FUN19	P28003	413 aa	Predicted RBP	4.08	□□□□□ -1.76
RPN8	YOR261C	PMT1	P33775	817 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	CMC1	P36064	111 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	FAU1	P40099	211 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	ESL1	P40456	1118 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	ARF3	P40994	183 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
RPN8	YOR261C	IRC6	P43615	237 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	YJL132W	P47014	750 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	RAV1	P47104	1357 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	ATG29	Q12092	213 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	RRD2	Q12461	358 aa		4.08	□□□□□ -1.76
RPN8	YOR261C	PUT3	P25502	979 aa	Predicted RBP	4.07	□□□□□ -1.76
RPN8	YOR261C	PCA1	P38360	1216 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	ELP2	P42935	788 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	ARK1	P53974	638 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	HNT3	Q08702	217 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	YLL056C	Q12177	298 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	GRX6	Q12438	231 aa		4.07	□□□□□ -1.76
RPN8	YOR261C	PMR1	P13586	950 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	CBS2	P14905	389 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	CKA1	P15790	372 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	GPI10	P30777	616 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	NDE1	P40215	560 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	POP1	P41812	875 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	URB2	P47108	1174 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	YGL108C	P53139	140 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	MSO1	P53604	210 aa	Known RBP	4.06	□□□□□ -1.76
RPN8	YOR261C	WSC2	P53832	503 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	RIM20	Q12033	661 aa		4.06	□□□□□ -1.76
RPN8	YOR261C	MET17	P06106	444 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	LPD1	P09624	499 aa	Known RBP	4.05	□□□□□ -1.76
RPN8	YOR261C	FRE2	P36033	711 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	AVT5	P38176	459 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	UTP9	P38882	575 aa	Known RBP	4.05	□□□□□ -1.76
RPN8	YOR261C	VMA13	P41807	478 aa	Known RBP	4.05	□□□□□ -1.76
RPN8	YOR261C	GCD10	P41814	478 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	HXT14	P42833	540 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	OCA1	P50946	238 aa	Predicted RBP	4.05	□□□□□ -1.76
RPN8	YOR261C	RQC1	Q05468	723 aa	Known RBP	4.05	□□□□□ -1.76
RPN8	YOR261C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RPN8	YOR261C	YCL021W-A	Q96VH3	125 aa		4.05	□□□□□ -1.76
RPN8	YOR261C	THI2	P38141	450 aa		4.04	□□□□□ -1.76
RPN8	YOR261C	SMF1	P38925	575 aa		4.04	□□□□□ -1.76
RPN8	YOR261C	RTP1	Q12751	981 aa		4.04	□□□□□ -1.76
RPN8	YOR261C	ATP10	P18496	279 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	ROX1	P25042	368 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	RAD14	P28519	371 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	YOX1	P34161	385 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	YBP1	P38315	674 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RPN8	YOR261C	AVT4	P50944	713 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	ART5	P53244	586 aa	Known RBP	4.03	□□□□□ -1.76
RPN8	YOR261C	MRPL19	P53875	158 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	PIR3	Q03180	325 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	COG4	Q06096	861 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	TSR2	Q06672	205 aa	Known RBP	4.03	□□□□□ -1.76
RPN8	YOR261C	YER078W-A	Q3E7A2	54 aa		4.03	□□□□□ -1.76
RPN8	YOR261C	LEU4	P06208	619 aa	Known RBP	4.02	□□□□□ -1.77
RPN8	YOR261C	RHO2	P06781	192 aa		4.02	□□□□□ -1.77
RPN8	YOR261C	SPB1	P25582	841 aa	Predicted RBP	4.02	□□□□□ -1.77
RPN8	YOR261C	NDI1	P32340	513 aa		4.02	□□□□□ -1.77
RPN8	YOR261C	GLC7	P32598	312 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms