RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	YDR415C	Q04033	374 aa	Predicted RBP	4.57	□□□□□ -1.68
LTO1	YNL260C	GPM3	Q12326	303 aa		4.57	□□□□□ -1.68
LTO1	YNL260C	PDH1	Q12428	516 aa	Known RBP	4.57	□□□□□ -1.68
LTO1	YNL260C	MES1	P00958	751 aa	Known RBP	4.56	□□□□□ -1.68
LTO1	YNL260C	HSP82	P02829	709 aa	Known RBP	4.56	□□□□□ -1.68
LTO1	YNL260C	SGV1	P23293	657 aa	Known RBP	4.56	□□□□□ -1.68
LTO1	YNL260C	MGM1	P32266	881 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	THI2	P38141	450 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	RRT2	P38332	387 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	GND1	P38720	489 aa	Known RBP	4.56	□□□□□ -1.68
LTO1	YNL260C	FET5	P43561	622 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
LTO1	YNL260C	SKO1	Q02100	647 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	NRT1	Q08485	598 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	BSC1	Q12140	328 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	ARP6	Q12509	438 aa		4.56	□□□□□ -1.68
LTO1	YNL260C	GPH1	P06738	902 aa	Known RBP	4.55	□□□□□ -1.68
LTO1	YNL260C	ATP10	P18496	279 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	OPI1	P21957	404 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	MGR1	P25573	417 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	FUN19	P28003	413 aa	Predicted RBP	4.55	□□□□□ -1.68
LTO1	YNL260C	VHC1	P38329	1120 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	YGL082W	P53155	381 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	YGR111W	P53265	400 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	SMA1	Q02651	245 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	HOT1	Q03213	719 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	IVY1	Q04934	453 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	PHO92	Q06390	306 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	UBX3	Q12229	455 aa		4.55	□□□□□ -1.68
LTO1	YNL260C	SUC2	P00724	532 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	HIP1	P06775	603 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	URA4	P20051	364 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	SNT1	P25357	1226 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	ATP11	P32453	318 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	NIP100	P33420	868 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	CBP4	P37267	147 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	SLM4	P38247	162 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	MMS4	P38257	691 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	RRP3	P38712	501 aa	Known RBP	4.54	□□□□□ -1.68
LTO1	YNL260C	PCL6	P40038	420 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	YMR147W	P40218	223 aa	Known RBP	4.54	□□□□□ -1.68
LTO1	YNL260C	PCI8	P40512	444 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	SAM50	P53969	484 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	BET4	Q00618	327 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	MSS11	Q03825	758 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	RSF1	Q05043	376 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	HEL2	Q05580	639 aa	Known RBP	4.54	□□□□□ -1.68
LTO1	YNL260C	DCI1	Q08558	271 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	SPE3	Q12074	293 aa	Known RBP	4.54	□□□□□ -1.68
LTO1	YNL260C	VAM3	Q12241	283 aa		4.54	□□□□□ -1.68
LTO1	YNL260C	SEC62	P21825	274 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	YCP4	P25349	247 aa	Known RBP	4.53	□□□□□ -1.68
LTO1	YNL260C	BRF1	P29056	596 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	ACH1	P32316	526 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	UTR4	P32626	227 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	REC114	P32841	428 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	VPS17	P32913	551 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	YNK1	P36010	153 aa	Known RBP	4.53	□□□□□ -1.68
LTO1	YNL260C	RXT2	P38255	430 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	APE4	P38821	490 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	SYG1	P40528	902 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	RPS0B	P46654	252 aa	Known RBP	4.53	□□□□□ -1.68
LTO1	YNL260C	CUL3	P53202	744 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	GPI1	P53306	609 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	TDA7	P53882	636 aa	Predicted RBP	4.53	□□□□□ -1.68
LTO1	YNL260C	ACL4	Q03771	387 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	YMR130W	Q04223	302 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	YMR254C	Q04838	102 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	HSP42	Q12329	375 aa		4.53	□□□□□ -1.68
LTO1	YNL260C	DPH2	P32461	534 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	HIR2	P32480	875 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	MIC60	P36112	540 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	OSH3	P38713	996 aa	Known RBP	4.52	□□□□□ -1.69
LTO1	YNL260C	YHR054C	P38780	354 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	SPC97	P38863	823 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	SEC28	P40509	296 aa	Known RBP	4.52	□□□□□ -1.69
LTO1	YNL260C	EFM4	P40516	257 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	AZF1	P41696	914 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	KTR5	P53966	522 aa	Predicted RBP	4.52	□□□□□ -1.69
LTO1	YNL260C	SLD5	Q03406	294 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	MMR1	Q06324	491 aa		4.52	□□□□□ -1.69
LTO1	YNL260C	APL5	Q08951	932 aa	Known RBP	4.52	□□□□□ -1.69
LTO1	YNL260C	CFT2	Q12102	859 aa	Predicted RBP	4.52	□□□□□ -1.69
LTO1	YNL260C	LEU4	P06208	619 aa	Known RBP	4.51	□□□□□ -1.69
LTO1	YNL260C	GLK1	P17709	500 aa	Known RBP	4.51	□□□□□ -1.69
LTO1	YNL260C	BEM1	P29366	551 aa		4.51	□□□□□ -1.69
LTO1	YNL260C	VPH1	P32563	840 aa	Known RBP	4.51	□□□□□ -1.69
LTO1	YNL260C	GYP6	P32806	458 aa		4.51	□□□□□ -1.69
LTO1	YNL260C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
LTO1	YNL260C	SEC5	P89102	971 aa		4.51	□□□□□ -1.69
LTO1	YNL260C	YMR034C	Q05131	434 aa	Predicted RBP	4.51	□□□□□ -1.69
LTO1	YNL260C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
LTO1	YNL260C	DIS3	Q08162	1001 aa	Known RBP	4.51	□□□□□ -1.69
LTO1	YNL260C	DSE3	Q08729	430 aa		4.51	□□□□□ -1.69
LTO1	YNL260C	AEP3	Q12089	606 aa		4.51	□□□□□ -1.69
LTO1	YNL260C	RIP1	P08067	215 aa		4.5	□□□□□ -1.69
LTO1	YNL260C	NAT1	P12945	854 aa	Known RBP	4.5	□□□□□ -1.69
LTO1	YNL260C	SPO7	P18410	259 aa		4.5	□□□□□ -1.69
LTO1	YNL260C	CLN1	P20437	546 aa		4.5	□□□□□ -1.69
LTO1	YNL260C	PPZ1	P26570	692 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms