RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C YDR109CQ04585 715 aa4.78□□□□□ -1.64
NUP116YMR047C YLR001CQ07895 862 aa4.78□□□□□ -1.64
NUP116YMR047C AEP3Q12089 606 aa4.78□□□□□ -1.64
NUP116YMR047C FAB1P34756 2278 aa4.78□□□□□ -1.65
NUP116YMR047C PRP9P19736 530 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C PRI2P20457 528 aa4.77□□□□□ -1.65
NUP116YMR047C YSP3P25036 478 aa4.77□□□□□ -1.65
NUP116YMR047C ACH1P32316 526 aa4.77□□□□□ -1.65
NUP116YMR047C MGM101P32787 269 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C YPT52P36018 234 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C MUD2P36084 527 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C YMR262WP38430 313 aa4.77□□□□□ -1.65
NUP116YMR047C DLD3P39976 496 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C IME4P41833 600 aa4.77□□□□□ -1.65
NUP116YMR047C AQR1P53943 586 aa4.77□□□□□ -1.65
NUP116YMR047C YAT1P80235 687 aa4.77□□□□□ -1.65
NUP116YMR047C RNY1Q02933 434 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C YDR132CQ03900 495 aa4.77□□□□□ -1.65
NUP116YMR047C ATG23Q06671 453 aa4.77□□□□□ -1.65
NUP116YMR047C RAD10P06838 210 aa4.77□□□□□ -1.65
NUP116YMR047C CUP1-1P0CX80 61 aa4.77□□□□□ -1.65
NUP116YMR047C CUP1-2P0CX81 61 aa4.77□□□□□ -1.65
NUP116YMR047C ENA1P13587 1091 aa4.77□□□□□ -1.65
NUP116YMR047C ABF1P14164 731 aa4.77□□□□□ -1.65
NUP116YMR047C YSR3P23501 404 aa4.77□□□□□ -1.65
NUP116YMR047C NAM9P27929 486 aa4.77□□□□□ -1.65
NUP116YMR047C ELO1P39540 310 aa4.77□□□□□ -1.65
NUP116YMR047C IRC6P43615 237 aa4.77□□□□□ -1.65
NUP116YMR047C TOM22P49334 152 aa4.77□□□□□ -1.65
NUP116YMR047C IMD3P50095 523 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C NRD1P53617 575 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
NUP116YMR047C MRPL50P53724 139 aa4.77□□□□□ -1.65
NUP116YMR047C SAM50P53969 484 aa4.77□□□□□ -1.65
NUP116YMR047C ENA2Q01896 1091 aa4.77□□□□□ -1.65
NUP116YMR047C RRP17Q04031 235 aaPredicted RBP4.77□□□□□ -1.65
NUP116YMR047C SSL1Q04673 461 aaPredicted RBP4.77□□□□□ -1.65
NUP116YMR047C BSC2Q05611 235 aa4.77□□□□□ -1.65
NUP116YMR047C NOP6Q07623 225 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C YEH2Q07950 538 aa4.77□□□□□ -1.65
NUP116YMR047C RTK1Q12100 620 aaPredicted RBP4.77□□□□□ -1.65
NUP116YMR047C ENA5Q12691 1091 aa4.77□□□□□ -1.65
NUP116YMR047C HSF1P10961 833 aa4.77□□□□□ -1.65
NUP116YMR047C SPS22P25380 463 aa4.77□□□□□ -1.65
NUP116YMR047C YCR101CP25607 182 aa4.77□□□□□ -1.65
NUP116YMR047C DOA4P32571 926 aa4.77□□□□□ -1.65
NUP116YMR047C MRT4P33201 236 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C SOH1P38633 127 aa4.77□□□□□ -1.65
NUP116YMR047C PIG2P40187 538 aa4.77□□□□□ -1.65
NUP116YMR047C NDE1P40215 560 aa4.77□□□□□ -1.65
NUP116YMR047C SER33P40510 469 aa4.77□□□□□ -1.65
NUP116YMR047C BIR1P47134 954 aa4.77□□□□□ -1.65
NUP116YMR047C GSF2Q04697 403 aaKnown RBP4.77□□□□□ -1.65
NUP116YMR047C RTT103Q05543 409 aa4.77□□□□□ -1.65
NUP116YMR047C YPD1Q07688 167 aa4.77□□□□□ -1.65
NUP116YMR047C VHS3Q08438 674 aa4.77□□□□□ -1.65
NUP116YMR047C PHO5P00635 467 aa4.76□□□□□ -1.65
NUP116YMR047C PUT2P07275 575 aa4.76□□□□□ -1.65
NUP116YMR047C GLN4P13188 809 aaKnown RBP4.76□□□□□ -1.65
NUP116YMR047C RCN1P36054 211 aa4.76□□□□□ -1.65
NUP116YMR047C MNN1P39106 762 aa4.76□□□□□ -1.65
NUP116YMR047C SKI8Q02793 397 aaPredicted RBP4.76□□□□□ -1.65
NUP116YMR047C BNA5Q05979 453 aa4.76□□□□□ -1.65
NUP116YMR047C GRS2Q06817 618 aa4.76□□□□□ -1.65
NUP116YMR047C YOR059CQ08448 450 aaKnown RBP4.76□□□□□ -1.65
NUP116YMR047C AI3P03877 415 aa4.76□□□□□ -1.65
NUP116YMR047C MRPL32P25348 183 aa4.76□□□□□ -1.65
NUP116YMR047C HSP30P25619 332 aa4.76□□□□□ -1.65
NUP116YMR047C YBL010CP32788 280 aa4.76□□□□□ -1.65
NUP116YMR047C SCD5P34758 872 aa4.76□□□□□ -1.65
NUP116YMR047C FLC2P39719 783 aa4.76□□□□□ -1.65
NUP116YMR047C SSO2P39926 295 aa4.76□□□□□ -1.65
NUP116YMR047C NOP9P47077 666 aaKnown RBP4.76□□□□□ -1.65
NUP116YMR047C YML6P51998 286 aa4.76□□□□□ -1.65
NUP116YMR047C SUN4P53616 420 aa4.76□□□□□ -1.65
NUP116YMR047C BOP3P53958 396 aa4.76□□□□□ -1.65
NUP116YMR047C EGD1Q02642 157 aaKnown RBP4.76□□□□□ -1.65
NUP116YMR047C SWP1Q02795 286 aa4.76□□□□□ -1.65
NUP116YMR047C VPS16Q03308 798 aa4.76□□□□□ -1.65
NUP116YMR047C BUD22Q04347 519 aaKnown RBP4.76□□□□□ -1.65
NUP116YMR047C ECI1Q05871 280 aa4.76□□□□□ -1.65
NUP116YMR047C VAC14Q06708 880 aa4.76□□□□□ -1.65
NUP116YMR047C YBR298C-AQ8TGK4 73 aa4.76□□□□□ -1.65
NUP116YMR047C HSH49Q99181 213 aaPredicted RBP4.76□□□□□ -1.65
NUP116YMR047C YLR149CQ99296 730 aa4.76□□□□□ -1.65
NUP116YMR047C COX5AP00424 153 aa4.75□□□□□ -1.65
NUP116YMR047C PEP5P12868 1029 aa4.75□□□□□ -1.65
NUP116YMR047C PWP1P21304 576 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C RIM1P32445 135 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C ECM31P38122 312 aa4.75□□□□□ -1.65
NUP116YMR047C URA8P38627 578 aaPredicted RBP4.75□□□□□ -1.65
NUP116YMR047C STS1P38637 319 aa4.75□□□□□ -1.65
NUP116YMR047C SEO1P39709 593 aa4.75□□□□□ -1.65
NUP116YMR047C TIF34P40217 347 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C BRO1P48582 844 aa4.75□□□□□ -1.65
NUP116YMR047C APT1P49435 187 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C RAI1P53063 387 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C TWF1P53250 332 aa4.75□□□□□ -1.65
NUP116YMR047C NOG2P53742 486 aaKnown RBP4.75□□□□□ -1.65
NUP116YMR047C NUP100Q02629 959 aa4.75□□□□□ -1.65
NUP116YMR047C RRN5Q02983 363 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms