RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	ZIM17	P42844	174 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	ALK1	P43633	760 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	VPS25	P47142	202 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	YGR149W	P48236	432 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	SHR3	Q02774	210 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	RLI1	Q03195	608 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	YMR034C	Q05131	434 aa	Predicted RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	MCP2	Q06567	569 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	GPM3	Q12326	303 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	HSP82	P02829	709 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	RNA14	P25298	677 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	OTU2	P38747	307 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	CAK1	P43568	368 aa	Predicted RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	YPL068C	Q02749	293 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	OAZ1	Q02803	292 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	KAP120	Q02932	1032 aa		2.44	□□□□□ -2.02
LEU3	YLR451W	DIG1	Q03063	452 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	SPE3	Q12074	293 aa	Known RBP	2.44	□□□□□ -2.02
LEU3	YLR451W	HEL1	P36113	551 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	SLM4	P38247	162 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	SRP72	P38688	640 aa	Known RBP	2.43	□□□□□ -2.02
LEU3	YLR451W	APE4	P38821	490 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	FAU1	P40099	211 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	EFM4	P40516	257 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	SAM50	P53969	484 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	STP1	Q00947	519 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	HCR1	Q05775	265 aa	Known RBP	2.43	□□□□□ -2.02
LEU3	YLR451W	ORM2	Q06144	216 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	SYO1	Q07395	620 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	RDR1	Q08904	546 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	RAV1	P47104	1357 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	RPB8	P20436	146 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	BUB3	P26449	341 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	ITR1	P30605	584 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	MCM4	P30665	933 aa	Known RBP	2.43	□□□□□ -2.02
LEU3	YLR451W	ECM15	P35195	104 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	ARC40	P38328	384 aa	Known RBP	2.43	□□□□□ -2.02
LEU3	YLR451W	PCA1	P38360	1216 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	TFG2	P41896	400 aa	Predicted RBP	2.43	□□□□□ -2.02
LEU3	YLR451W	COS5	P47187	383 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	YLR352W	Q06479	807 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	SSK1	Q07084	712 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	COS7	Q07788	383 aa		2.43	□□□□□ -2.02
LEU3	YLR451W	TPM1	P17536	199 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	HNM1	P19807	563 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	YCR007C	P25354	239 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	MGM1	P32266	881 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	AFG1	P32317	509 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	HIR2	P32480	875 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	FRE1	P32791	686 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	YPT53	P36019	220 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	ASC1	P38011	319 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	SAS2	P40963	338 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	LCB2	P40970	561 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	TES1	P41903	349 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	SSU1	P41930	458 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	SCW4	P53334	386 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	DUG3	P53871	357 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	YNL181W	P53878	407 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	RSF1	Q05043	376 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	DON1	Q05610	365 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	ILV5	P06168	395 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	LPD1	P09624	499 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	FUN19	P28003	413 aa	Predicted RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	ERG1	P32476	496 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	STV1	P37296	890 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	CSM2	P40465	213 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	PCI8	P40512	444 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	IAH1	P41734	238 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	RRT5	P43607	289 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	MDV1	P47025	714 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	ALT2	P52892	507 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	MSS11	Q03825	758 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	ECI1	Q05871	280 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	CDC45	Q08032	650 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	SRL1	Q08673	210 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	VAM3	Q12241	283 aa		2.42	□□□□□ -2.02
LEU3	YLR451W	RPN5	Q12250	445 aa	Known RBP	2.42	□□□□□ -2.02
LEU3	YLR451W	GLN3	P18494	730 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	DBF4	P32325	704 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	ATO2	P32907	282 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	MDL1	P33310	695 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	SIP2	P34164	415 aa	Known RBP	2.41	□□□□□ -2.02
LEU3	YLR451W	RPT4	P53549	437 aa	Known RBP	2.41	□□□□□ -2.02
LEU3	YLR451W	ARP6	Q12509	438 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	PAR32	Q12515	295 aa	Known RBP	2.41	□□□□□ -2.02
LEU3	YLR451W	HIP1	P06775	603 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
LEU3	YLR451W	DAP2	P18962	818 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	RAD14	P28519	371 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	HCS1	P34243	683 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	HAT2	P39984	401 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	OCA1	P50946	238 aa	Predicted RBP	2.41	□□□□□ -2.02
LEU3	YLR451W	SXM1	Q04175	944 aa	Known RBP	2.41	□□□□□ -2.02
LEU3	YLR451W	ISA2	Q12425	185 aa		2.41	□□□□□ -2.02
LEU3	YLR451W	YML133C	Q03099	1374 aa		2.4	□□□□□ -2.02
LEU3	YLR451W	YLL067C	Q07888	1374 aa		2.4	□□□□□ -2.02
LEU3	YLR451W	YLL066C	Q99208	1374 aa		2.4	□□□□□ -2.02
LEU3	YLR451W	RPL1A	P0CX43	217 aa	Known RBP	2.4	□□□□□ -2.02
LEU3	YLR451W	RPL1B	P0CX44	217 aa	Known RBP	2.4	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms