RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SUL2Q12325 893 aa9.67□□□□□ -0.86
SHH4YLR164W PPH21P23594 369 aa9.66□□□□□ -0.86
SHH4YLR164W GBP2P25555 427 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
SHH4YLR164W FUN30P31380 1131 aa9.66□□□□□ -0.86
SHH4YLR164W DPH5P32469 300 aaPredicted RBP9.66□□□□□ -0.86
SHH4YLR164W MEI5P32489 222 aa9.66□□□□□ -0.86
SHH4YLR164W ATO2P32907 282 aa9.66□□□□□ -0.86
SHH4YLR164W RIM101P33400 625 aa9.66□□□□□ -0.86
SHH4YLR164W MRPL17P36528 281 aa9.66□□□□□ -0.86
SHH4YLR164W PDX3P38075 228 aaKnown RBP9.66□□□□□ -0.86
SHH4YLR164W ROT2P38138 954 aa9.66□□□□□ -0.86
SHH4YLR164W GIC1P38785 314 aa9.66□□□□□ -0.86
SHH4YLR164W JEM1P40358 645 aa9.66□□□□□ -0.86
SHH4YLR164W CAB2P40506 365 aa9.66□□□□□ -0.86
SHH4YLR164W SSU1P41930 458 aa9.66□□□□□ -0.86
SHH4YLR164W HSP31Q04432 237 aa9.66□□□□□ -0.86
SHH4YLR164W GPN2Q08726 347 aaPredicted RBP9.66□□□□□ -0.86
SHH4YLR164W COX3P00420 269 aa9.65□□□□□ -0.86
SHH4YLR164W AI3P03877 415 aa9.65□□□□□ -0.86
SHH4YLR164W ARG3P05150 338 aa9.65□□□□□ -0.86
SHH4YLR164W KKQ8P36004 724 aa9.65□□□□□ -0.86
SHH4YLR164W UBP14P38237 781 aaKnown RBP9.65□□□□□ -0.86
SHH4YLR164W YBR071WP38243 211 aa9.65□□□□□ -0.86
SHH4YLR164W IST2P38250 946 aa9.65□□□□□ -0.86
SHH4YLR164W PLB1P39105 664 aa9.65□□□□□ -0.86
SHH4YLR164W AYR1P40471 297 aa9.65□□□□□ -0.86
SHH4YLR164W IMA5P40884 581 aa9.65□□□□□ -0.86
SHH4YLR164W NOP9P47077 666 aaKnown RBP9.65□□□□□ -0.86
SHH4YLR164W HXT16P47185 567 aa9.65□□□□□ -0.86
SHH4YLR164W SWS2P53937 143 aa9.65□□□□□ -0.86
SHH4YLR164W HXT15P54854 567 aa9.65□□□□□ -0.86
SHH4YLR164W HOT1Q03213 719 aa9.65□□□□□ -0.86
SHH4YLR164W ECM11Q04110 302 aa9.65□□□□□ -0.86
SHH4YLR164W YLR111WQ12528 110 aa9.65□□□□□ -0.86
SHH4YLR164W TPK2P06245 380 aa9.64□□□□□ -0.87
SHH4YLR164W KIN2P13186 1147 aaKnown RBP9.64□□□□□ -0.87
SHH4YLR164W RED1P14291 827 aa9.64□□□□□ -0.87
SHH4YLR164W MET30P39014 640 aa9.64□□□□□ -0.87
SHH4YLR164W PCF11P39081 626 aaPredicted RBP9.64□□□□□ -0.87
SHH4YLR164W RGA1P39083 1007 aa9.64□□□□□ -0.87
SHH4YLR164W FMP32P43557 207 aa9.64□□□□□ -0.87
SHH4YLR164W MTR3P48240 250 aaPredicted RBP9.64□□□□□ -0.87
SHH4YLR164W BIO3P50277 480 aa9.64□□□□□ -0.87
SHH4YLR164W DIA3P52290 468 aa9.64□□□□□ -0.87
SHH4YLR164W TRM82Q03774 444 aa9.64□□□□□ -0.87
SHH4YLR164W NSL1Q12143 216 aa9.64□□□□□ -0.87
SHH4YLR164W TY4A-HQ6Q5P6 413 aa9.64□□□□□ -0.87
SHH4YLR164W RAS2P01120 322 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W MRP13P12686 339 aa9.63□□□□□ -0.87
SHH4YLR164W UGA1P17649 471 aa9.63□□□□□ -0.87
SHH4YLR164W RDS2P19541 446 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W YAP1P19880 650 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W PHO87P25360 923 aa9.63□□□□□ -0.87
SHH4YLR164W RNQ1P25367 405 aa9.63□□□□□ -0.87
SHH4YLR164W CSM1P25651 190 aa9.63□□□□□ -0.87
SHH4YLR164W IDH2P28241 369 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W AAR2P32357 355 aaPredicted RBP9.63□□□□□ -0.87
SHH4YLR164W PET309P32522 965 aaPredicted RBP9.63□□□□□ -0.87
SHH4YLR164W YCR087C-AP37263 153 aa9.63□□□□□ -0.87
SHH4YLR164W TRM7P38238 310 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W FAD1P38913 306 aa9.63□□□□□ -0.87
SHH4YLR164W AIM22P47051 409 aa9.63□□□□□ -0.87
SHH4YLR164W MUP1P50276 574 aa9.63□□□□□ -0.87
SHH4YLR164W ERP6P53198 216 aa9.63□□□□□ -0.87
SHH4YLR164W SUN4P53616 420 aa9.63□□□□□ -0.87
SHH4YLR164W IDP3P53982 420 aaKnown RBP9.63□□□□□ -0.87
SHH4YLR164W YMR010WQ03687 405 aa9.63□□□□□ -0.87
SHH4YLR164W YOL131WQ08270 108 aa9.63□□□□□ -0.87
SHH4YLR164W MLH3Q12083 715 aa9.63□□□□□ -0.87
SHH4YLR164W STT4P37297 1900 aa9.62□□□□□ -0.87
SHH4YLR164W MSS116P15424 664 aaKnown RBP9.62□□□□□ -0.87
SHH4YLR164W PRI2P20457 528 aa9.62□□□□□ -0.87
SHH4YLR164W PEX6P33760 1030 aa9.62□□□□□ -0.87
SHH4YLR164W COS111P38308 924 aa9.62□□□□□ -0.87
SHH4YLR164W TDP1P38319 544 aa9.62□□□□□ -0.87
SHH4YLR164W DMA1P38823 416 aa9.62□□□□□ -0.87
SHH4YLR164W ECM10P39987 644 aa9.62□□□□□ -0.87
SHH4YLR164W YPS6P40583 537 aa9.62□□□□□ -0.87
SHH4YLR164W MET12P46151 657 aa9.62□□□□□ -0.87
SHH4YLR164W GUS1P46655 708 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
SHH4YLR164W FHN1P53279 174 aa9.62□□□□□ -0.87
SHH4YLR164W YNL140CP53910 189 aa9.62□□□□□ -0.87
SHH4YLR164W YNL033WP53964 284 aa9.62□□□□□ -0.87
SHH4YLR164W YNL019CP53975 284 aa9.62□□□□□ -0.87
SHH4YLR164W NAN1Q02931 896 aaKnown RBP9.62□□□□□ -0.87
SHH4YLR164W EFR3Q03653 782 aaKnown RBP9.62□□□□□ -0.87
SHH4YLR164W GGA1Q06336 557 aa9.62□□□□□ -0.87
SHH4YLR164W BMT6Q12291 365 aa9.62□□□□□ -0.87
SHH4YLR164W SNF8Q12483 233 aa9.62□□□□□ -0.87
SHH4YLR164W NHA1Q99271 985 aa9.62□□□□□ -0.87
SHH4YLR164W RAP1P11938 827 aa9.61□□□□□ -0.87
SHH4YLR164W TFC1P32367 649 aa9.61□□□□□ -0.87
SHH4YLR164W SPT16P32558 1035 aaKnown RBP9.61□□□□□ -0.87
SHH4YLR164W SEC17P32602 292 aa9.61□□□□□ -0.87
SHH4YLR164W TFB1P32776 642 aa9.61□□□□□ -0.87
SHH4YLR164W PIM1P36775 1133 aa9.61□□□□□ -0.87
SHH4YLR164W AXL2P38928 823 aa9.61□□□□□ -0.87
SHH4YLR164W CEM1P39525 442 aa9.61□□□□□ -0.87
SHH4YLR164W RGI1P40043 161 aaPredicted RBP9.61□□□□□ -0.87
SHH4YLR164W RAD33Q04231 177 aa9.61□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms