RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C OTU2P38747 307 aaKnown RBP4.06□□□□□ -1.76
USB1YLR132C RTS2P40962 232 aa4.06□□□□□ -1.76
USB1YLR132C ALK1P43633 760 aaKnown RBP4.06□□□□□ -1.76
USB1YLR132C PYK2P52489 506 aaKnown RBP4.06□□□□□ -1.76
USB1YLR132C TWF1P53250 332 aa4.06□□□□□ -1.76
USB1YLR132C ESBP6P53918 673 aa4.06□□□□□ -1.76
USB1YLR132C TOF2Q02208 771 aa4.06□□□□□ -1.76
USB1YLR132C SYF1Q04048 859 aaPredicted RBP4.06□□□□□ -1.76
USB1YLR132C RSF1Q05043 376 aa4.06□□□□□ -1.76
USB1YLR132C YLR352WQ06479 807 aa4.06□□□□□ -1.76
USB1YLR132C RLM1Q12224 676 aa4.06□□□□□ -1.76
USB1YLR132C ARP6Q12509 438 aa4.06□□□□□ -1.76
USB1YLR132C BRR1Q99177 341 aaPredicted RBP4.06□□□□□ -1.76
USB1YLR132C TOM1Q03280 3268 aa4.06□□□□□ -1.76
USB1YLR132C FAS2P19097 1887 aaKnown RBP4.05□□□□□ -1.76
USB1YLR132C MET17P06106 444 aa4.05□□□□□ -1.76
USB1YLR132C PEP5P12868 1029 aa4.05□□□□□ -1.76
USB1YLR132C MTR2P34232 184 aaKnown RBP4.05□□□□□ -1.76
USB1YLR132C CMC1P36064 111 aa4.05□□□□□ -1.76
USB1YLR132C RKM3P38222 552 aa4.05□□□□□ -1.76
USB1YLR132C ERG7P38604 731 aa4.05□□□□□ -1.76
USB1YLR132C YIL152WP40455 235 aa4.05□□□□□ -1.76
USB1YLR132C SGN1P40561 250 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
USB1YLR132C PET130P47065 347 aa4.05□□□□□ -1.76
USB1YLR132C YMR254CQ04838 102 aa4.05□□□□□ -1.76
USB1YLR132C YDL057WQ07379 328 aa4.05□□□□□ -1.76
USB1YLR132C RTT109Q07794 436 aa4.05□□□□□ -1.76
USB1YLR132C MLH2Q07980 695 aa4.05□□□□□ -1.76
USB1YLR132C ATG29Q12092 213 aa4.05□□□□□ -1.76
USB1YLR132C SCM3Q12334 223 aa4.05□□□□□ -1.76
USB1YLR132C SEC39Q12745 709 aa4.05□□□□□ -1.76
USB1YLR132C YLL066CQ99208 1374 aa4.04□□□□□ -1.76
USB1YLR132C MRE11P32829 692 aa4.04□□□□□ -1.76
USB1YLR132C WBP1P33767 430 aaKnown RBP4.04□□□□□ -1.76
USB1YLR132C PHD1P36093 366 aa4.04□□□□□ -1.76
USB1YLR132C YEL057CP39983 233 aa4.04□□□□□ -1.76
USB1YLR132C PKP2P53170 491 aa4.04□□□□□ -1.76
USB1YLR132C CUL3P53202 744 aa4.04□□□□□ -1.76
USB1YLR132C BET4Q00618 327 aa4.04□□□□□ -1.76
USB1YLR132C NUP100Q02629 959 aa4.04□□□□□ -1.76
USB1YLR132C TAF11Q04226 346 aa4.04□□□□□ -1.76
USB1YLR132C GLO2Q05584 274 aa4.04□□□□□ -1.76
USB1YLR132C YML133CQ03099 1374 aa4.03□□□□□ -1.76
USB1YLR132C YLL067CQ07888 1374 aa4.03□□□□□ -1.76
USB1YLR132C ROX1P25042 368 aa4.03□□□□□ -1.76
USB1YLR132C PRD1P25375 712 aa4.03□□□□□ -1.76
USB1YLR132C MGR1P25573 417 aa4.03□□□□□ -1.76
USB1YLR132C RPN2P32565 945 aaKnown RBP4.03□□□□□ -1.76
USB1YLR132C RAD24P32641 659 aa4.03□□□□□ -1.76
USB1YLR132C TRS65P32893 560 aa4.03□□□□□ -1.76
USB1YLR132C SHP1P34223 423 aa4.03□□□□□ -1.76
USB1YLR132C ARP1P38696 384 aa4.03□□□□□ -1.76
USB1YLR132C MET18P40469 1032 aa4.03□□□□□ -1.76
USB1YLR132C AXL1P40851 1208 aa4.03□□□□□ -1.76
USB1YLR132C SAD1P43589 448 aa4.03□□□□□ -1.76
USB1YLR132C YMR034CQ05131 434 aaPredicted RBP4.03□□□□□ -1.76
USB1YLR132C RRG1Q12167 365 aaPredicted RBP4.03□□□□□ -1.76
USB1YLR132C UTP10P42945 1769 aaKnown RBP4.03□□□□□ -1.76
USB1YLR132C YLR278CQ05854 1341 aa4.02□□□□□ -1.77
USB1YLR132C CLB3P24870 427 aa4.02□□□□□ -1.77
USB1YLR132C GPI10P30777 616 aa4.02□□□□□ -1.77
USB1YLR132C NPL6P32832 435 aa4.02□□□□□ -1.77
USB1YLR132C ARC40P38328 384 aaKnown RBP4.02□□□□□ -1.77
USB1YLR132C BZZ1P38822 633 aa4.02□□□□□ -1.77
USB1YLR132C YIL169CP40442 995 aa4.02□□□□□ -1.77
USB1YLR132C VTC2P43585 828 aa4.02□□□□□ -1.77
USB1YLR132C ALT2P52892 507 aa4.02□□□□□ -1.77
USB1YLR132C CAF130P53280 1122 aaPredicted RBP4.02□□□□□ -1.77
USB1YLR132C YPL014WQ02606 381 aa4.02□□□□□ -1.77
USB1YLR132C MSC1Q03104 513 aa4.02□□□□□ -1.77
USB1YLR132C FMP42Q04991 504 aa4.02□□□□□ -1.77
USB1YLR132C THP1Q08231 455 aa4.02□□□□□ -1.77
USB1YLR132C TYR1P20049 452 aa4.01□□□□□ -1.77
USB1YLR132C YCR043CP25361 127 aa4.01□□□□□ -1.77
USB1YLR132C VPS17P32913 551 aa4.01□□□□□ -1.77
USB1YLR132C YHR210CP38893 341 aa4.01□□□□□ -1.77
USB1YLR132C SMF1P38925 575 aa4.01□□□□□ -1.77
USB1YLR132C MET30P39014 640 aa4.01□□□□□ -1.77
USB1YLR132C HXT14P42833 540 aa4.01□□□□□ -1.77
USB1YLR132C JJJ1P53863 590 aa4.01□□□□□ -1.77
USB1YLR132C MSS11Q03825 758 aa4.01□□□□□ -1.77
USB1YLR132C PDS5Q04264 1277 aa4.01□□□□□ -1.77
USB1YLR132C RQC1Q05468 723 aaKnown RBP4.01□□□□□ -1.77
USB1YLR132C MRD1Q06106 887 aaKnown RBP4.01□□□□□ -1.77
USB1YLR132C YEH2Q07950 538 aa4.01□□□□□ -1.77
USB1YLR132C NDD1Q08887 554 aa4.01□□□□□ -1.77
USB1YLR132C RTN2Q12443 393 aa4.01□□□□□ -1.77
USB1YLR132C FIG2P25653 1609 aa4□□□□□ -1.77
USB1YLR132C PMD1P32634 1753 aa4□□□□□ -1.77
USB1YLR132C HNM1P19807 563 aa4□□□□□ -1.77
USB1YLR132C REC107P21651 314 aa4□□□□□ -1.77
USB1YLR132C PMT1P33775 817 aa4□□□□□ -1.77
USB1YLR132C BNA4P38169 460 aa4□□□□□ -1.77
USB1YLR132C YAT2P40017 923 aa4□□□□□ -1.77
USB1YLR132C YIR014WP40570 242 aa4□□□□□ -1.77
USB1YLR132C FET5P43561 622 aa4□□□□□ -1.77
USB1YLR132C ATG27P46989 271 aa4□□□□□ -1.77
USB1YLR132C RHO4Q00246 291 aa4□□□□□ -1.77
USB1YLR132C DIG1Q03063 452 aaKnown RBP4□□□□□ -1.77
USB1YLR132C COQ9Q05779 260 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms