RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	SPS22	P25380	463 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	FAA1	P30624	700 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	YMC1	P32331	307 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	LYP1	P32487	611 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	NFU1	P32860	256 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	RPS1A	P33442	255 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	CTP1	P38152	299 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	RRN10	P38204	145 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	REV7	P38927	245 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	SMX2	P40204	77 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	HOC1	P47124	396 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	NNF2	P53253	936 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	GAD1	Q04792	585 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	PNS1	Q12412	539 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	AHA1	Q12449	350 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	YPL247C	Q12523	523 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	TRA1	P38811	3744 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	GUK1	P15454	187 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	YCR090C	P25654	182 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	YJU2	P28320	278 aa	Predicted RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	PHA2	P32452	334 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	YHR210C	P38893	341 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	PAC1	P39946	494 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	SER3	P40054	469 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	COA1	P40452	197 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	PSA1	P41940	361 aa	Known RBP	4.09	□□□□□ -1.75
FOX2	YKR009C	SDH1	Q00711	640 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	HDA3	Q06623	655 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	RAD34	Q06665	692 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	MCA1	Q08601	432 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	CDC26	P14724	124 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	PRP6	P19735	899 aa	Predicted RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	KIP2	P28743	706 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	PMT2	P31382	759 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	ASC1	P38011	319 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	IBD2	P53892	351 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	MPS1	P54199	764 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	CRN1	Q06440	651 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	MHT1	Q12525	324 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	IPP1	P00817	287 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	YPT1	P01123	206 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	HEM2	P05373	342 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	SSC1	P0CS90	654 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	KIN2	P13186	1147 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	SLM5	P25345	492 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	TAH1	P25638	111 aa	Predicted RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	NUP120	P35729	1037 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	MET30	P39014	640 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	YEN1	P40028	759 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	PEP8	P40335	379 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	JHD2	P47156	728 aa	Predicted RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	IBA57	P47158	497 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	SNP1	Q00916	300 aa	Predicted RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	VPS60	Q03390	229 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	HPT1	Q04178	221 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	CDA1	Q06702	301 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	REH1	Q06709	432 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	RAX1	Q08760	435 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	NKP1	Q12493	238 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	RPL43A	P0CX25	92 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	RPL43B	P0CX26	92 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	ERG1	P32476	496 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
FOX2	YKR009C	EHT1	P38295	451 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	MGE1	P38523	228 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	PRP39	P39682	629 aa	Known RBP	4.08	□□□□□ -1.76
FOX2	YKR009C	FRT2	P39734	528 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	APQ12	P40532	138 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	AXL1	P40851	1208 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	KXD1	P53158	218 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	YMR209C	Q03648	457 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	GAS3	Q03655	524 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	MDM30	Q05930	598 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	YDR056C	Q12025	205 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	RGT2	Q12300	763 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	YGR161W-C	Q3E744	92 aa		4.08	□□□□□ -1.76
FOX2	YKR009C	AGP1	P25376	633 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	CDC5	P32562	705 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	SEC24	P40482	926 aa	Known RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	CEP3	P40969	608 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	GCD10	P41814	478 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	OCA1	P50946	238 aa	Predicted RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	ZIP2	P53061	704 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	IST1	P53843	298 aa	Predicted RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	YNL260C	P53846	198 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	RMI1	Q02685	241 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YMR210W	Q03649	449 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TAF12	Q03761	539 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YMR155W	Q03795	547 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TPP1	Q03796	238 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	DFG5	Q05031	458 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	NBA1	Q08229	501 aa	Known RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	GPB1	Q08886	897 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	YPL245W	Q12179	454 aa	Known RBP	4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-LR1	P0C2J4	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-F	P0CX61	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-GR2	P0CX62	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	SLY41	P22215	453 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	TY2A-C	P25383	438 aa		4.07	□□□□□ -1.76
FOX2	YKR009C	VAC17	P25591	423 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms