RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C MSP1P28737 362 aa1.49□□□□□ -2.17
VPS55YJR044C SYN8P31377 255 aa1.49□□□□□ -2.17
VPS55YJR044C PDB1P32473 366 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C TCD2P36101 447 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C NTR2P36118 322 aaPredicted RBP1.49□□□□□ -2.17
VPS55YJR044C LAS1P36146 502 aaPredicted RBP1.49□□□□□ -2.17
VPS55YJR044C MMS4P38257 691 aa1.49□□□□□ -2.17
VPS55YJR044C GDT1P38301 280 aaPredicted RBP1.49□□□□□ -2.17
VPS55YJR044C DIA4P38705 446 aaPredicted RBP1.49□□□□□ -2.17
VPS55YJR044C DBP8P38719 431 aa1.49□□□□□ -2.17
VPS55YJR044C SEC31P38968 1273 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C YIL089WP40500 205 aa1.49□□□□□ -2.17
VPS55YJR044C MET28P40573 187 aa1.49□□□□□ -2.17
VPS55YJR044C CAK1P43568 368 aaPredicted RBP1.49□□□□□ -2.17
VPS55YJR044C DLD2P46681 530 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C GUF1P46943 645 aa1.49□□□□□ -2.17
VPS55YJR044C SMC3P47037 1230 aa1.49□□□□□ -2.17
VPS55YJR044C URB2P47108 1174 aa1.49□□□□□ -2.17
VPS55YJR044C YGR149WP48236 432 aa1.49□□□□□ -2.17
VPS55YJR044C YGR111WP53265 400 aa1.49□□□□□ -2.17
VPS55YJR044C BNI5P53890 448 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C CTL1Q03220 320 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C PDS5Q04264 1277 aa1.49□□□□□ -2.17
VPS55YJR044C RQC1Q05468 723 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C HEL2Q05580 639 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C DON1Q05610 365 aa1.49□□□□□ -2.17
VPS55YJR044C RRP45Q05636 305 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C ECM30Q06673 1274 aa1.49□□□□□ -2.17
VPS55YJR044C CUE5Q08412 411 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C RLM1Q12224 676 aa1.49□□□□□ -2.17
VPS55YJR044C INP53Q12271 1107 aa1.49□□□□□ -2.17
VPS55YJR044C GRX6Q12438 231 aa1.49□□□□□ -2.17
VPS55YJR044C PGA3Q12746 312 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C YOL159C-AQ3E769 90 aa1.49□□□□□ -2.17
VPS55YJR044C ARG81P05085 880 aa1.48□□□□□ -2.17
VPS55YJR044C RPC40P07703 335 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C RAP1P11938 827 aa1.48□□□□□ -2.17
VPS55YJR044C GLK1P17709 500 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C ART10P18634 518 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C PPH22P23595 377 aa1.48□□□□□ -2.17
VPS55YJR044C GID7P25569 745 aa1.48□□□□□ -2.17
VPS55YJR044C ERV1P27882 189 aa1.48□□□□□ -2.17
VPS55YJR044C GAC1P28006 793 aa1.48□□□□□ -2.17
VPS55YJR044C IDH2P28241 369 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C MCM4P30665 933 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C ATS1P31386 333 aa1.48□□□□□ -2.17
VPS55YJR044C AFG1P32317 509 aa1.48□□□□□ -2.17
VPS55YJR044C AGA1P32323 725 aa1.48□□□□□ -2.17
VPS55YJR044C PUP2P32379 260 aa1.48□□□□□ -2.17
VPS55YJR044C SSE2P32590 693 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C YME2P32843 850 aa1.48□□□□□ -2.17
VPS55YJR044C LTV1P34078 463 aa1.48□□□□□ -2.17
VPS55YJR044C YBR144CP34215 104 aa1.48□□□□□ -2.17
VPS55YJR044C CBP4P37267 147 aa1.48□□□□□ -2.17
VPS55YJR044C STV1P37296 890 aa1.48□□□□□ -2.17
VPS55YJR044C AAP1P37898 856 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C ARA1P38115 344 aa1.48□□□□□ -2.17
VPS55YJR044C MSR1P38714 643 aa1.48□□□□□ -2.17
VPS55YJR044C YNG2P38806 282 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C UIP3P39547 235 aa1.48□□□□□ -2.17
VPS55YJR044C YER130CP39959 443 aa1.48□□□□□ -2.17
VPS55YJR044C ECM10P39987 644 aa1.48□□□□□ -2.17
VPS55YJR044C EFM4P40516 257 aa1.48□□□□□ -2.17
VPS55YJR044C SGN1P40561 250 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
VPS55YJR044C YFR020WP43600 232 aa1.48□□□□□ -2.17
VPS55YJR044C LYS4P49367 693 aaPredicted RBP1.48□□□□□ -2.17
VPS55YJR044C FMS1P50264 508 aa1.48□□□□□ -2.17
VPS55YJR044C PKP2P53170 491 aa1.48□□□□□ -2.17
VPS55YJR044C YGR250CP53316 781 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C DUG3P53871 357 aa1.48□□□□□ -2.17
VPS55YJR044C NCS2P53923 493 aaPredicted RBP1.48□□□□□ -2.17
VPS55YJR044C NUP100Q02629 959 aa1.48□□□□□ -2.17
VPS55YJR044C YPL107WQ02873 248 aa1.48□□□□□ -2.17
VPS55YJR044C PRP3Q03338 469 aaPredicted RBP1.48□□□□□ -2.17
VPS55YJR044C PRP42Q03776 544 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C FIN1Q03898 291 aa1.48□□□□□ -2.17
VPS55YJR044C YDR131CQ03899 556 aa1.48□□□□□ -2.17
VPS55YJR044C YMR130WQ04223 302 aa1.48□□□□□ -2.17
VPS55YJR044C VTI1Q04338 217 aa1.48□□□□□ -2.17
VPS55YJR044C EMI2Q04409 500 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C MRD1Q06106 887 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C YLR345WQ06137 509 aa1.48□□□□□ -2.17
VPS55YJR044C SPH1Q06160 661 aa1.48□□□□□ -2.17
VPS55YJR044C YDL218WQ07629 317 aa1.48□□□□□ -2.17
VPS55YJR044C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
VPS55YJR044C TEN1Q07921 160 aa1.48□□□□□ -2.17
VPS55YJR044C YOL159CQ08300 171 aa1.48□□□□□ -2.17
VPS55YJR044C AEP3Q12089 606 aa1.48□□□□□ -2.17
VPS55YJR044C MED2Q12124 431 aa1.48□□□□□ -2.17
VPS55YJR044C RPN5Q12250 445 aaKnown RBP1.48□□□□□ -2.17
VPS55YJR044C HSP42Q12329 375 aa1.48□□□□□ -2.17
VPS55YJR044C SPE4Q12455 300 aa1.48□□□□□ -2.17
VPS55YJR044C SEC39Q12745 709 aa1.48□□□□□ -2.17
VPS55YJR044C RAV1P47104 1357 aa1.47□□□□□ -2.17
VPS55YJR044C SPS4P09937 338 aa1.47□□□□□ -2.17
VPS55YJR044C APE1P14904 514 aa1.47□□□□□ -2.17
VPS55YJR044C TPM1P17536 199 aaKnown RBP1.47□□□□□ -2.17
VPS55YJR044C URA4P20051 364 aa1.47□□□□□ -2.17
VPS55YJR044C RRP7P25368 297 aaPredicted RBP1.47□□□□□ -2.17
VPS55YJR044C URA7P28274 579 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms