RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W SEC14P24280 304 aaKnown RBP5.08□□□□□ -1.6
RPB4YJL140W ADY2P25613 283 aa5.08□□□□□ -1.6
RPB4YJL140W BRF1P29056 596 aa5.08□□□□□ -1.6
RPB4YJL140W CYM1P32898 989 aa5.08□□□□□ -1.6
RPB4YJL140W CUE2P36075 443 aaKnown RBP5.08□□□□□ -1.6
RPB4YJL140W SET3P36124 751 aa5.08□□□□□ -1.6
RPB4YJL140W TAE1P38340 232 aa5.08□□□□□ -1.6
RPB4YJL140W RRP3P38712 501 aaKnown RBP5.08□□□□□ -1.6
RPB4YJL140W YEL028WP39989 153 aa5.08□□□□□ -1.6
RPB4YJL140W YJL107CP42947 387 aa5.08□□□□□ -1.6
RPB4YJL140W SNG1P46950 547 aa5.08□□□□□ -1.6
RPB4YJL140W TMA22P47089 198 aaPredicted RBP5.08□□□□□ -1.6
RPB4YJL140W TRF5P48561 642 aaKnown RBP5.08□□□□□ -1.6
RPB4YJL140W AIM14P53109 570 aa5.08□□□□□ -1.6
RPB4YJL140W PCL10P53124 433 aa5.08□□□□□ -1.6
RPB4YJL140W YTP1P53584 459 aa5.08□□□□□ -1.6
RPB4YJL140W NRM1P53718 249 aa5.08□□□□□ -1.6
RPB4YJL140W SLT2Q00772 484 aa5.08□□□□□ -1.6
RPB4YJL140W YMR209CQ03648 457 aa5.08□□□□□ -1.6
RPB4YJL140W BNA5Q05979 453 aa5.08□□□□□ -1.6
RPB4YJL140W VHS3Q08438 674 aa5.08□□□□□ -1.6
RPB4YJL140W LDB17Q12342 491 aa5.08□□□□□ -1.6
RPB4YJL140W RKM5Q12367 367 aa5.08□□□□□ -1.6
RPB4YJL140W PEX11Q12462 236 aa5.08□□□□□ -1.6
RPB4YJL140W YLR149CQ99296 730 aa5.08□□□□□ -1.6
RPB4YJL140W SUC2P00724 532 aa5.07□□□□□ -1.6
RPB4YJL140W CDC9P04819 755 aa5.07□□□□□ -1.6
RPB4YJL140W PMR1P13586 950 aa5.07□□□□□ -1.6
RPB4YJL140W YCL068CP25593 260 aa5.07□□□□□ -1.6
RPB4YJL140W GDA1P32621 518 aa5.07□□□□□ -1.6
RPB4YJL140W MRS6P32864 603 aaKnown RBP5.07□□□□□ -1.6
RPB4YJL140W PMT1P33775 817 aa5.07□□□□□ -1.6
RPB4YJL140W APM3P38153 483 aa5.07□□□□□ -1.6
RPB4YJL140W HEK2P38199 381 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6 RIP-Chip
RPB4YJL140W YHR112CP38716 378 aa5.07□□□□□ -1.6
RPB4YJL140W YDR089WP38966 869 aa5.07□□□□□ -1.6
RPB4YJL140W YJL206CP39529 758 aa5.07□□□□□ -1.6
RPB4YJL140W MGS1P40151 587 aa5.07□□□□□ -1.6
RPB4YJL140W LIA1P47120 325 aaKnown RBP5.07□□□□□ -1.6
RPB4YJL140W PAN2P53010 1115 aaPredicted RBP5.07□□□□□ -1.6
RPB4YJL140W MNT2P53059 558 aa5.07□□□□□ -1.6
RPB4YJL140W VPS73P53142 486 aaKnown RBP5.07□□□□□ -1.6
RPB4YJL140W SUB1P54000 292 aaKnown RBP5.07□□□□□ -1.6
RPB4YJL140W SMX3P54999 86 aaPredicted RBP5.07□□□□□ -1.6
RPB4YJL140W YMR178WQ03219 274 aaKnown RBP5.07□□□□□ -1.6
RPB4YJL140W UGO1Q03327 502 aa5.07□□□□□ -1.6
RPB4YJL140W NHX1Q04121 633 aa5.07□□□□□ -1.6
RPB4YJL140W SWC7Q06707 132 aa5.07□□□□□ -1.6
RPB4YJL140W THI73Q07904 523 aa5.07□□□□□ -1.6
RPB4YJL140W OCA6Q12454 224 aa5.07□□□□□ -1.6
RPB4YJL140W YKL033W-AQ86ZR7 236 aa5.07□□□□□ -1.6
RPB4YJL140W BRR2P32639 2163 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W COX5AP00424 153 aa5.06□□□□□ -1.6
RPB4YJL140W GAL4P04386 881 aa5.06□□□□□ -1.6
RPB4YJL140W MIS1P09440 975 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W GPA2P10823 449 aa5.06□□□□□ -1.6
RPB4YJL140W HSP26P15992 214 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
RPB4YJL140W MRPL8P22353 238 aa5.06□□□□□ -1.6
RPB4YJL140W HOG1P32485 435 aa5.06□□□□□ -1.6
RPB4YJL140W KAR9P32526 644 aa5.06□□□□□ -1.6
RPB4YJL140W RRN3P36070 627 aa5.06□□□□□ -1.6
RPB4YJL140W RRP14P36080 434 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W FUI1P38196 639 aa5.06□□□□□ -1.6
RPB4YJL140W MED8P38304 223 aa5.06□□□□□ -1.6
RPB4YJL140W TDP1P38319 544 aa5.06□□□□□ -1.6
RPB4YJL140W HSM3P38348 480 aa5.06□□□□□ -1.6
RPB4YJL140W DSS1P39112 969 aa5.06□□□□□ -1.6
RPB4YJL140W PEP8P40335 379 aa5.06□□□□□ -1.6
RPB4YJL140W DPH1P40487 425 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W CIS3P47001 227 aa5.06□□□□□ -1.6
RPB4YJL140W LSC1P53598 329 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W CSL4P53859 292 aaPredicted RBP5.06□□□□□ -1.6
RPB4YJL140W REC102Q02721 264 aa5.06□□□□□ -1.6
RPB4YJL140W INP2Q03824 705 aa5.06□□□□□ -1.6
RPB4YJL140W YML096WQ04489 525 aa5.06□□□□□ -1.6
RPB4YJL140W GRX8Q05926 109 aa5.06□□□□□ -1.6
RPB4YJL140W CMS1Q07897 291 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W AAD15Q08361 143 aa5.06□□□□□ -1.6
RPB4YJL140W SPE4Q12455 300 aa5.06□□□□□ -1.6
RPB4YJL140W YMR030W-AQ3E760 96 aa5.06□□□□□ -1.6
RPB4YJL140W AFI1Q99222 893 aa5.06□□□□□ -1.6
RPB4YJL140W POL2P21951 2222 aaKnown RBP5.06□□□□□ -1.6
RPB4YJL140W STE4P18851 423 aa5.05□□□□□ -1.6
RPB4YJL140W SNT1P25357 1226 aa5.05□□□□□ -1.6
RPB4YJL140W NDI1P32340 513 aa5.05□□□□□ -1.6
RPB4YJL140W PDB1P32473 366 aaKnown RBP5.05□□□□□ -1.6
RPB4YJL140W NIP1P32497 812 aaKnown RBP5.05□□□□□ -1.6
RPB4YJL140W SMI1P32566 505 aa5.05□□□□□ -1.6
RPB4YJL140W PHO89P38361 574 aa5.05□□□□□ -1.6
RPB4YJL140W SSP120P39931 234 aaKnown RBP5.05□□□□□ -1.6
RPB4YJL140W YIL166CP40445 542 aa5.05□□□□□ -1.6
RPB4YJL140W ROK1P45818 564 aaPredicted RBP5.05□□□□□ -1.6
RPB4YJL140W YJL132WP47014 750 aa5.05□□□□□ -1.6
RPB4YJL140W ASN2P49090 572 aaKnown RBP5.05□□□□□ -1.6
RPB4YJL140W NBP35P52920 328 aa5.05□□□□□ -1.6
RPB4YJL140W BUD32P53323 261 aa5.05□□□□□ -1.6
RPB4YJL140W YML119WQ03208 357 aa5.05□□□□□ -1.6
RPB4YJL140W PPN1Q04119 674 aa5.05□□□□□ -1.6
RPB4YJL140W CDC123Q05791 360 aa5.05□□□□□ -1.6
RPB4YJL140W YPR114WQ06107 315 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms