RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C MET17P06106 444 aa2.48□□□□□ -2.01
TPM2YIL138C CDC31P06704 161 aaKnown RBP2.48□□□□□ -2.01
TPM2YIL138C PEP5P12868 1029 aa2.48□□□□□ -2.01
TPM2YIL138C PAP1P29468 568 aaKnown RBP2.48□□□□□ -2.01
TPM2YIL138C GPI10P30777 616 aa2.48□□□□□ -2.01
TPM2YIL138C WBP1P33767 430 aaKnown RBP2.48□□□□□ -2.01
TPM2YIL138C YEL057CP39983 233 aa2.48□□□□□ -2.01
TPM2YIL138C IRC6P43615 237 aa2.48□□□□□ -2.01
TPM2YIL138C BUD32P53323 261 aa2.48□□□□□ -2.01
TPM2YIL138C TOF2Q02208 771 aa2.48□□□□□ -2.01
TPM2YIL138C GLO2Q05584 274 aa2.48□□□□□ -2.01
TPM2YIL138C YCL021W-AQ96VH3 125 aa2.48□□□□□ -2.01
TPM2YIL138C ATR1P13090 542 aa2.47□□□□□ -2.01
TPM2YIL138C RED1P14291 827 aa2.47□□□□□ -2.01
TPM2YIL138C CKA1P15790 372 aa2.47□□□□□ -2.01
TPM2YIL138C ELO2P25358 347 aa2.47□□□□□ -2.01
TPM2YIL138C MSN2P33748 704 aa2.47□□□□□ -2.01
TPM2YIL138C SHP1P34223 423 aa2.47□□□□□ -2.01
TPM2YIL138C UTP9P38882 575 aaKnown RBP2.47□□□□□ -2.01
TPM2YIL138C YHR210CP38893 341 aa2.47□□□□□ -2.01
TPM2YIL138C MET28P40573 187 aa2.47□□□□□ -2.01
TPM2YIL138C ALK1P43633 760 aaKnown RBP2.47□□□□□ -2.01
TPM2YIL138C RHO4Q00246 291 aa2.47□□□□□ -2.01
TPM2YIL138C FIN1Q03898 291 aa2.47□□□□□ -2.01
TPM2YIL138C THP1Q08231 455 aa2.47□□□□□ -2.01
TPM2YIL138C RIM20Q12033 661 aa2.47□□□□□ -2.01
TPM2YIL138C ATG29Q12092 213 aa2.47□□□□□ -2.01
TPM2YIL138C HSH49Q99181 213 aaPredicted RBP2.47□□□□□ -2.01
TPM2YIL138C HSL1P34244 1518 aa2.47□□□□□ -2.01
TPM2YIL138C HEM2P05373 342 aa2.46□□□□□ -2.02
TPM2YIL138C PEP4P07267 405 aaKnown RBP2.46□□□□□ -2.02
TPM2YIL138C PRD1P25375 712 aa2.46□□□□□ -2.02
TPM2YIL138C TUL1P36096 758 aa2.46□□□□□ -2.02
TPM2YIL138C BNA4P38169 460 aa2.46□□□□□ -2.02
TPM2YIL138C VID24P38263 362 aa2.46□□□□□ -2.02
TPM2YIL138C NOC2P39744 710 aaKnown RBP2.46□□□□□ -2.02
TPM2YIL138C CSM2P40465 213 aa2.46□□□□□ -2.02
TPM2YIL138C MET18P40469 1032 aa2.46□□□□□ -2.02
TPM2YIL138C AIM22P47051 409 aa2.46□□□□□ -2.02
TPM2YIL138C SRB7P47822 140 aa2.46□□□□□ -2.02
TPM2YIL138C ALT2P52892 507 aa2.46□□□□□ -2.02
TPM2YIL138C PDS5Q04264 1277 aa2.46□□□□□ -2.02
TPM2YIL138C YLR287CQ05881 355 aa2.46□□□□□ -2.02
TPM2YIL138C MRD1Q06106 887 aaKnown RBP2.46□□□□□ -2.02
TPM2YIL138C HNT3Q08702 217 aa2.46□□□□□ -2.02
TPM2YIL138C NCE102Q12207 173 aaRIP-Chip data2.46□□□□□ -2.02not detected
TPM2YIL138C RAV1P47104 1357 aa2.46□□□□□ -2.02
TPM2YIL138C RAD52P06778 471 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C COR1P07256 457 aa2.45□□□□□ -2.02
TPM2YIL138C APE1P14904 514 aa2.45□□□□□ -2.02
TPM2YIL138C FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C SGV1P23293 657 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C ROX1P25042 368 aa2.45□□□□□ -2.02
TPM2YIL138C MRE11P32829 692 aa2.45□□□□□ -2.02
TPM2YIL138C CMC1P36064 111 aa2.45□□□□□ -2.02
TPM2YIL138C PMU1P36069 295 aa2.45□□□□□ -2.02
TPM2YIL138C TIF4631P39935 952 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C YJR154WP47181 346 aa2.45□□□□□ -2.02
TPM2YIL138C TWF1P53250 332 aa2.45□□□□□ -2.02
TPM2YIL138C ZPR1P53303 486 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C MSO1P53604 210 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C APJ1P53940 528 aa2.45□□□□□ -2.02
TPM2YIL138C SYF1Q04048 859 aaPredicted RBP2.45□□□□□ -2.02
TPM2YIL138C YMR087WQ04299 284 aa2.45□□□□□ -2.02
TPM2YIL138C YOR365CQ08844 703 aa2.45□□□□□ -2.02
TPM2YIL138C SEC39Q12745 709 aa2.45□□□□□ -2.02
TPM2YIL138C RRP12Q12754 1228 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C YDL007C-AQ2V2Q0 85 aa2.45□□□□□ -2.02
TPM2YIL138C SWR1Q05471 1514 aa2.45□□□□□ -2.02
TPM2YIL138C SPT6P23615 1451 aaKnown RBP2.45□□□□□ -2.02
TPM2YIL138C CAR1P00812 333 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C RPL31BP0C2H9 113 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C NAT1P12945 854 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C SPT15P13393 240 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C PRS1P32895 427 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C PMT1P33775 817 aa2.44□□□□□ -2.02
TPM2YIL138C TCM62P38228 572 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C MUM2P38236 366 aa2.44□□□□□ -2.02
TPM2YIL138C OSH3P38713 996 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C SMF1P38925 575 aa2.44□□□□□ -2.02
TPM2YIL138C MBB1P39534 108 aa2.44□□□□□ -2.02
TPM2YIL138C HXT14P42833 540 aa2.44□□□□□ -2.02
TPM2YIL138C HEF3P53978 1044 aaKnown RBP2.44□□□□□ -2.02
TPM2YIL138C TAF11Q04226 346 aa2.44□□□□□ -2.02
TPM2YIL138C IVY1Q04934 453 aa2.44□□□□□ -2.02
TPM2YIL138C RRG1Q12167 365 aaPredicted RBP2.44□□□□□ -2.02
TPM2YIL138C RTN2Q12443 393 aa2.44□□□□□ -2.02
TPM2YIL138C SOD1P00445 154 aaKnown RBP2.43□□□□□ -2.02
TPM2YIL138C MES1P00958 751 aaKnown RBP2.43□□□□□ -2.02
TPM2YIL138C SUP35P05453 685 aaKnown RBP2.43□□□□□ -2.02
TPM2YIL138C RPL3P14126 387 aaKnown RBP2.43□□□□□ -2.02
TPM2YIL138C PRP2P20095 876 aaPredicted RBP2.43□□□□□ -2.02
TPM2YIL138C SPR1P32603 445 aa2.43□□□□□ -2.02
TPM2YIL138C FRE1P32791 686 aa2.43□□□□□ -2.02
TPM2YIL138C DUG2P38149 878 aa2.43□□□□□ -2.02
TPM2YIL138C OTU2P38747 307 aaKnown RBP2.43□□□□□ -2.02
TPM2YIL138C VPS52P39904 641 aa2.43□□□□□ -2.02
TPM2YIL138C POP1P41812 875 aa2.43□□□□□ -2.02
TPM2YIL138C SCD6P45978 349 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
TPM2YIL138C DRN1P53255 507 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms