RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W YMR010WQ03687 405 aa10.9□□□□□ -0.66
SIM1YIL123W YKU80Q04437 629 aa10.9□□□□□ -0.66
SIM1YIL123W SSQ1Q05931 657 aaPredicted RBP10.9□□□□□ -0.66
SIM1YIL123W YPR011CQ12251 326 aa10.9□□□□□ -0.66
SIM1YIL123W NKP1Q12493 238 aa10.9□□□□□ -0.66
SIM1YIL123W PRI2P20457 528 aa10.89□□□□□ -0.67
SIM1YIL123W VPH2P32341 215 aa10.89□□□□□ -0.67
SIM1YIL123W ATO2P32907 282 aa10.89□□□□□ -0.67
SIM1YIL123W DMA1P38823 416 aa10.89□□□□□ -0.67
SIM1YIL123W MTW1P39731 289 aa10.89□□□□□ -0.67
SIM1YIL123W DCP2P53550 970 aaKnown RBP10.89□□□□□ -0.67
SIM1YIL123W YNR068CP53754 272 aa10.89□□□□□ -0.67
SIM1YIL123W SPO19Q03029 223 aa10.89□□□□□ -0.67
SIM1YIL123W MET31Q03081 177 aa10.89□□□□□ -0.67
SIM1YIL123W PEX12Q04370 399 aa10.89□□□□□ -0.67
SIM1YIL123W YMR034CQ05131 434 aaPredicted RBP10.89□□□□□ -0.67
SIM1YIL123W RPS14AP06367 137 aaKnown RBP10.88□□□□□ -0.67
SIM1YIL123W YKR104WP0CE69 306 aa10.88□□□□□ -0.67
SIM1YIL123W RDS2P19541 446 aaKnown RBP10.88□□□□□ -0.67
SIM1YIL123W HXT4P32467 576 aa10.88□□□□□ -0.67
SIM1YIL123W INM1P38710 295 aa10.88□□□□□ -0.67
SIM1YIL123W RIX1P38883 763 aaPredicted RBP10.88□□□□□ -0.67
SIM1YIL123W HXT6P39003 570 aaKnown RBP10.88□□□□□ -0.67
SIM1YIL123W HXT7P39004 570 aa10.88□□□□□ -0.67
SIM1YIL123W CCT6P39079 546 aa10.88□□□□□ -0.67
SIM1YIL123W RPS14BP39516 138 aaKnown RBP10.88□□□□□ -0.67
SIM1YIL123W RBG1P39729 369 aa10.88□□□□□ -0.67
SIM1YIL123W PFA3P42836 336 aa10.88□□□□□ -0.67
SIM1YIL123W TDA7P53882 636 aaPredicted RBP10.88□□□□□ -0.67
SIM1YIL123W GIP3Q03016 1276 aa10.88□□□□□ -0.67
SIM1YIL123W YDR239CQ03780 787 aa10.88□□□□□ -0.67
SIM1YIL123W YMR226CQ05016 267 aaKnown RBP10.88□□□□□ -0.67
SIM1YIL123W BSC2Q05611 235 aa10.88□□□□□ -0.67
SIM1YIL123W YLL007CQ07799 665 aa10.88□□□□□ -0.67
SIM1YIL123W MLH3Q12083 715 aa10.88□□□□□ -0.67
SIM1YIL123W RGT2Q12300 763 aa10.88□□□□□ -0.67
SIM1YIL123W HIS5P07172 385 aa10.87□□□□□ -0.67
SIM1YIL123W BET2P20133 325 aa10.87□□□□□ -0.67
SIM1YIL123W CDC5P32562 705 aa10.87□□□□□ -0.67
SIM1YIL123W ERV46P39727 415 aa10.87□□□□□ -0.67
SIM1YIL123W YEL073CP39974 107 aa10.87□□□□□ -0.67
SIM1YIL123W GIM4P40005 111 aaKnown RBP10.87□□□□□ -0.67
SIM1YIL123W NDE1P40215 560 aa10.87□□□□□ -0.67
SIM1YIL123W RIC1P40395 1056 aa10.87□□□□□ -0.67
SIM1YIL123W YNL140CP53910 189 aa10.87□□□□□ -0.67
SIM1YIL123W NDL1Q06568 189 aa10.87□□□□□ -0.67
SIM1YIL123W GPI11Q06636 219 aa10.87□□□□□ -0.67
SIM1YIL123W MFG1Q07684 458 aa10.87□□□□□ -0.67
SIM1YIL123W ATG10Q07879 167 aa10.87□□□□□ -0.67
SIM1YIL123W YOL131WQ08270 108 aa10.87□□□□□ -0.67
SIM1YIL123W NMD4Q12129 218 aa10.87□□□□□ -0.67
SIM1YIL123W RPN5Q12250 445 aaKnown RBP10.87□□□□□ -0.67
SIM1YIL123W PFK27Q12471 397 aaPredicted RBP10.87□□□□□ -0.67
SIM1YIL123W BRR1Q99177 341 aaPredicted RBP10.87□□□□□ -0.67
SIM1YIL123W TY4B-PA0A0B7P3V8 1104 aa10.86□□□□□ -0.67
SIM1YIL123W FBA1P14540 359 aaKnown RBP10.86□□□□□ -0.67
SIM1YIL123W PEX3P28795 441 aa10.86□□□□□ -0.67
SIM1YIL123W CDC3P32457 520 aaKnown RBP10.86□□□□□ -0.67
SIM1YIL123W YKL097CP34245 136 aa10.86□□□□□ -0.67
SIM1YIL123W EMC3P36039 253 aa10.86□□□□□ -0.67
SIM1YIL123W YHR078WP38799 552 aa10.86□□□□□ -0.67
SIM1YIL123W YPT35P38815 214 aaKnown RBP10.86□□□□□ -0.67
SIM1YIL123W ATG7P38862 630 aa10.86□□□□□ -0.67
SIM1YIL123W RSP5P39940 809 aaKnown RBP10.86□□□□□ -0.67
SIM1YIL123W ELP2P42935 788 aa10.86□□□□□ -0.67
SIM1YIL123W ATH1P48016 1211 aa10.86□□□□□ -0.67
SIM1YIL123W SPR6Q01684 191 aa10.86□□□□□ -0.67
SIM1YIL123W AAT1Q01802 451 aa10.86□□□□□ -0.67
SIM1YIL123W ATG17Q06410 417 aa10.86□□□□□ -0.67
SIM1YIL123W ATG29Q12092 213 aa10.86□□□□□ -0.67
SIM1YIL123W YLL054CQ12244 843 aa10.86□□□□□ -0.67
SIM1YIL123W SNF8Q12483 233 aa10.86□□□□□ -0.67
SIM1YIL123W Q0010Q9ZZX9 128 aa10.86□□□□□ -0.67
SIM1YIL123W RAD7P06779 565 aa10.85□□□□□ -0.67
SIM1YIL123W MST1P07236 462 aa10.85□□□□□ -0.67
SIM1YIL123W KAR1P11927 433 aa10.85□□□□□ -0.67
SIM1YIL123W DAP2P18962 818 aa10.85□□□□□ -0.67
SIM1YIL123W YAP1P19880 650 aaKnown RBP10.85□□□□□ -0.67
SIM1YIL123W POL4P25615 582 aa10.85□□□□□ -0.67
SIM1YIL123W APE2P32454 952 aaKnown RBP10.85□□□□□ -0.67
SIM1YIL123W GLG1P36143 616 aa10.85□□□□□ -0.67
SIM1YIL123W COS111P38308 924 aa10.85□□□□□ -0.67
SIM1YIL123W GCV1P48015 400 aa10.85□□□□□ -0.67
SIM1YIL123W NBP35P52920 328 aa10.85□□□□□ -0.67
SIM1YIL123W GOR1P53839 350 aa10.85□□□□□ -0.67
SIM1YIL123W ARG7Q04728 441 aa10.85□□□□□ -0.67
SIM1YIL123W TRM8Q12009 286 aa10.85□□□□□ -0.67
SIM1YIL123W VPS68Q12016 184 aa10.85□□□□□ -0.67
SIM1YIL123W YOL159C-AQ3E769 90 aa10.85□□□□□ -0.67
SIM1YIL123W INH1P01097 85 aa10.84□□□□□ -0.67
SIM1YIL123W ATP4P05626 244 aa10.84□□□□□ -0.67
SIM1YIL123W SIS1P25294 352 aaKnown RBP10.84□□□□□ -0.67
SIM1YIL123W SLM5P25345 492 aaKnown RBP10.84□□□□□ -0.67
SIM1YIL123W IMG2P25642 146 aaPredicted RBP10.84□□□□□ -0.67
SIM1YIL123W RPL5P26321 297 aaKnown RBP10.84□□□□□ -0.67
SIM1YIL123W GUT1P32190 709 aa10.84□□□□□ -0.67
SIM1YIL123W PEP12P32854 288 aa10.84□□□□□ -0.67
SIM1YIL123W YKL151CP36059 337 aa10.84□□□□□ -0.67
SIM1YIL123W TAE1P38340 232 aa10.84□□□□□ -0.67
SIM1YIL123W GDH3P39708 457 aa10.84□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 847.8 ms