RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C CPR6P53691 371 aaKnown RBP3.33□□□□□ -1.88
PCI8YIL071C UBX4P54730 416 aa3.33□□□□□ -1.88
PCI8YIL071C TGL2P54857 326 aa3.33□□□□□ -1.88
PCI8YIL071C SLD5Q03406 294 aa3.33□□□□□ -1.88
PCI8YIL071C TRS130Q03660 1102 aa3.33□□□□□ -1.88
PCI8YIL071C FAR8Q05040 523 aa3.33□□□□□ -1.88
PCI8YIL071C ECM7Q06200 448 aa3.33□□□□□ -1.88
PCI8YIL071C YLR177WQ06251 628 aa3.33□□□□□ -1.88
PCI8YIL071C CMS1Q07897 291 aaKnown RBP3.33□□□□□ -1.88
PCI8YIL071C TAF10Q12030 206 aa3.33□□□□□ -1.88
PCI8YIL071C RPL4AP10664 362 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C NAT1P12945 854 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C PMS1P14242 873 aa3.32□□□□□ -1.88
PCI8YIL071C CDC23P16522 626 aa3.32□□□□□ -1.88
PCI8YIL071C SPO16P17122 198 aa3.32□□□□□ -1.88
PCI8YIL071C CWH43P25618 953 aa3.32□□□□□ -1.88
PCI8YIL071C PTP2P29461 750 aa3.32□□□□□ -1.88
PCI8YIL071C RME1P32338 300 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C HXT4P32467 576 aa3.32□□□□□ -1.88
PCI8YIL071C CBF2P32504 956 aa3.32□□□□□ -1.88
PCI8YIL071C VID24P38263 362 aa3.32□□□□□ -1.88
PCI8YIL071C PCA1P38360 1216 aa3.32□□□□□ -1.88
PCI8YIL071C DSN1P40568 576 aa3.32□□□□□ -1.88
PCI8YIL071C MKT1P40850 830 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C RPL4BP49626 362 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C SLD3P53135 668 aa3.32□□□□□ -1.88
PCI8YIL071C DRN1P53255 507 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C YNL040WP53960 456 aaPredicted RBP3.32□□□□□ -1.88
PCI8YIL071C MET14Q02196 202 aa3.32□□□□□ -1.88
PCI8YIL071C SKY1Q03656 742 aa3.32□□□□□ -1.88
PCI8YIL071C IVY1Q04934 453 aa3.32□□□□□ -1.88
PCI8YIL071C ABP140Q08641 628 aaKnown RBP3.32□□□□□ -1.88
PCI8YIL071C CFT2Q12102 859 aaPredicted RBP3.32□□□□□ -1.88
PCI8YIL071C YDR018CQ12185 396 aa3.32□□□□□ -1.88
PCI8YIL071C RRD2Q12461 358 aa3.32□□□□□ -1.88
PCI8YIL071C COX4P04037 155 aa3.31□□□□□ -1.88
PCI8YIL071C ASP3-2P0CX77 362 aa3.31□□□□□ -1.88
PCI8YIL071C ASP3-3P0CX78 362 aa3.31□□□□□ -1.88
PCI8YIL071C ASP3-4P0CX79 362 aa3.31□□□□□ -1.88
PCI8YIL071C ASP3-1P0CZ17 362 aa3.31□□□□□ -1.88
PCI8YIL071C GYP6P32806 458 aa3.31□□□□□ -1.88
PCI8YIL071C FUI1P38196 639 aa3.31□□□□□ -1.88
PCI8YIL071C HEK2P38199 381 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
PCI8YIL071C MMS4P38257 691 aa3.31□□□□□ -1.88
PCI8YIL071C POP4P38336 279 aa3.31□□□□□ -1.88
PCI8YIL071C SAW1P39735 261 aa3.31□□□□□ -1.88
PCI8YIL071C TMA108P40462 946 aa3.31□□□□□ -1.88
PCI8YIL071C SNZ3P43545 298 aa3.31□□□□□ -1.88
PCI8YIL071C SCD6P45978 349 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
PCI8YIL071C ASG7P46993 209 aa3.31□□□□□ -1.88
PCI8YIL071C COS12P53053 380 aa3.31□□□□□ -1.88
PCI8YIL071C TAN1P53072 289 aaPredicted RBP3.31□□□□□ -1.88
PCI8YIL071C SNZ2P53824 298 aa3.31□□□□□ -1.88
PCI8YIL071C YNL034WP53963 612 aa3.31□□□□□ -1.88
PCI8YIL071C IZH1Q03419 316 aa3.31□□□□□ -1.88
PCI8YIL071C YMR027WQ04371 470 aa3.31□□□□□ -1.88
PCI8YIL071C KAP95Q06142 861 aaKnown RBP3.31□□□□□ -1.88
PCI8YIL071C MLC2Q06580 163 aa3.31□□□□□ -1.88
PCI8YIL071C SHS1Q07657 551 aa3.31□□□□□ -1.88
PCI8YIL071C NGL1Q08213 363 aaKnown RBP3.31□□□□□ -1.88
PCI8YIL071C PEX15Q08215 383 aa3.31□□□□□ -1.88
PCI8YIL071C VPS13Q07878 3144 aa3.3□□□□□ -1.88
PCI8YIL071C TEF1P02994 458 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C CMD1P06787 147 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C PUT4P15380 627 aa3.3□□□□□ -1.88
PCI8YIL071C TRX1P22217 103 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C MGT1P26188 188 aa3.3□□□□□ -1.88
PCI8YIL071C HEM12P32347 362 aaPredicted RBP3.3□□□□□ -1.88
PCI8YIL071C HEL1P36113 551 aa3.3□□□□□ -1.88
PCI8YIL071C RPC37P36121 282 aa3.3□□□□□ -1.88
PCI8YIL071C MSR1P38714 643 aa3.3□□□□□ -1.88
PCI8YIL071C IES5P40060 125 aa3.3□□□□□ -1.88
PCI8YIL071C PFK26P40433 827 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C YIL089WP40500 205 aa3.3□□□□□ -1.88
PCI8YIL071C AZF1P41696 914 aa3.3□□□□□ -1.88
PCI8YIL071C IRC5P43610 853 aa3.3□□□□□ -1.88
PCI8YIL071C RNR4P49723 345 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C PSP1P50896 841 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C YML6P51998 286 aa3.3□□□□□ -1.88
PCI8YIL071C RRT6P53117 311 aaPredicted RBP3.3□□□□□ -1.88
PCI8YIL071C YGL036WP53185 909 aaPredicted RBP3.3□□□□□ -1.88
PCI8YIL071C SLT2Q00772 484 aa3.3□□□□□ -1.88
PCI8YIL071C SXM1Q04175 944 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C PRM6Q04705 352 aa3.3□□□□□ -1.88
PCI8YIL071C YPL191CQ08930 360 aa3.3□□□□□ -1.88
PCI8YIL071C SGT2Q12118 346 aaKnown RBP3.3□□□□□ -1.88
PCI8YIL071C NKP1Q12493 238 aa3.3□□□□□ -1.88
PCI8YIL071C AVL9Q12500 764 aa3.3□□□□□ -1.88
PCI8YIL071C IMA3P0CW40 589 aa3.29□□□□□ -1.88
PCI8YIL071C IMA4P0CW41 589 aa3.29□□□□□ -1.88
PCI8YIL071C CDC24P11433 854 aaPredicted RBP3.29□□□□□ -1.88
PCI8YIL071C GLN3P18494 730 aa3.29□□□□□ -1.88
PCI8YIL071C KGD2P19262 463 aaPredicted RBP3.29□□□□□ -1.88
PCI8YIL071C SEC1P30619 724 aaKnown RBP3.29□□□□□ -1.88
PCI8YIL071C YBP1P38315 674 aa3.29□□□□□ -1.88
PCI8YIL071C SWC5P38326 303 aa3.29□□□□□ -1.88
PCI8YIL071C HSM3P38348 480 aa3.29□□□□□ -1.88
PCI8YIL071C SRP68P38687 599 aaKnown RBP3.29□□□□□ -1.88
PCI8YIL071C SMF2P38778 549 aa3.29□□□□□ -1.88
PCI8YIL071C YHR054CP38780 354 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms