RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	SWD3	P38123	315 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	SDT1	P53078	280 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	DUO1	P53168	247 aa	Known RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	HEF3	P53978	1044 aa	Known RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	PAL1	Q05518	499 aa	Known RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	PBA1	Q05778	276 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	MHR1	Q06630	226 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	YBR126W-A	Q8TGU7	68 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	MES1	P00958	751 aa	Known RBP	3.05	□□□□□ -1.92
CKA1	YIL035C	SPR1	P32603	445 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
CKA1	YIL035C	ALG5	P40350	334 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	RRT5	P43607	289 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	IMD4	P50094	524 aa	Known RBP	3.05	□□□□□ -1.92
CKA1	YIL035C	AVT4	P50944	713 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	ZPR1	P53303	486 aa	Known RBP	3.05	□□□□□ -1.92
CKA1	YIL035C	CAF40	P53829	373 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	MRPL35	Q06678	367 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	YEH1	Q07804	573 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	NOP58	Q12499	511 aa	Known RBP	3.05	□□□□□ -1.92
CKA1	YIL035C	YPT6	Q99260	215 aa		3.05	□□□□□ -1.92
CKA1	YIL035C	SEF1	P34228	1148 aa		3.04	□□□□□ -1.92
CKA1	YIL035C	MSR1	P38714	643 aa		3.04	□□□□□ -1.92
CKA1	YIL035C	TIS11	P47977	285 aa		3.04	□□□□□ -1.92
CKA1	YIL035C	ART5	P53244	586 aa	Known RBP	3.04	□□□□□ -1.92
CKA1	YIL035C	YDL121C	Q07541	149 aa		3.04	□□□□□ -1.92
CKA1	YIL035C	HRT3	Q12347	344 aa		3.04	□□□□□ -1.92
CKA1	YIL035C	HHF1	P02309	103 aa	Known RBP	3.03	□□□□□ -1.92
CKA1	YIL035C	CLN3	P13365	580 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	PRP2	P20095	876 aa	Predicted RBP	3.03	□□□□□ -1.92
CKA1	YIL035C	BUB3	P26449	341 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	FRE2	P36033	711 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	MUD2	P36084	527 aa	Known RBP	3.03	□□□□□ -1.92
CKA1	YIL035C	VID30	P53076	958 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	RRN11	Q04712	507 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	OPY2	Q06810	360 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	ESA1	Q08649	445 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	RRG7	Q08774	242 aa	Predicted RBP	3.03	□□□□□ -1.92
CKA1	YIL035C	THP3	Q12049	470 aa	Known RBP	3.03	□□□□□ -1.92
CKA1	YIL035C	NMD4	Q12129	218 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	RLM1	Q12224	676 aa		3.03	□□□□□ -1.92
CKA1	YIL035C	SOD1	P00445	154 aa	Known RBP	3.02	□□□□□ -1.93
CKA1	YIL035C	COR1	P07256	457 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	TRX2	P22803	104 aa	Known RBP	3.02	□□□□□ -1.93
CKA1	YIL035C	NDI1	P32340	513 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	ATP11	P32453	318 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	MFT1	P33441	392 aa	Known RBP	3.02	□□□□□ -1.93
CKA1	YIL035C	TCD2	P36101	447 aa	Known RBP	3.02	□□□□□ -1.93
CKA1	YIL035C	KEL1	P38853	1164 aa	Known RBP	3.02	□□□□□ -1.93
CKA1	YIL035C	FLC2	P39719	783 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
CKA1	YIL035C	REE1	P40893	198 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	YFL067W	P43537	175 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	YLR152C	P54072	576 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	YMR018W	Q04364	514 aa		3.02	□□□□□ -1.93
CKA1	YIL035C	CPR4	P25334	318 aa		3.01	□□□□□ -1.93
CKA1	YIL035C	ARO2	P28777	376 aa	Known RBP	3.01	□□□□□ -1.93
CKA1	YIL035C	PAP1	P29468	568 aa	Known RBP	3.01	□□□□□ -1.93
CKA1	YIL035C	GLC7	P32598	312 aa	Known RBP	3.01	□□□□□ -1.93
CKA1	YIL035C	YGL039W	P53183	348 aa	Known RBP	3.01	□□□□□ -1.93
CKA1	YIL035C	HUA2	Q12134	243 aa		3.01	□□□□□ -1.93
CKA1	YIL035C	ADH2	P00331	348 aa	Known RBP	3	□□□□□ -1.93
CKA1	YIL035C	SUP35	P05453	685 aa	Known RBP	3	□□□□□ -1.93
CKA1	YIL035C	HSC82	P15108	705 aa	Known RBP	3	□□□□□ -1.93
CKA1	YIL035C	MCM10	P32354	571 aa		3	□□□□□ -1.93
CKA1	YIL035C	NAT2	P37293	288 aa		3	□□□□□ -1.93
CKA1	YIL035C	SRO77	P38163	1010 aa		3	□□□□□ -1.93
CKA1	YIL035C	MUM2	P38236	366 aa		3	□□□□□ -1.93
CKA1	YIL035C	MBB1	P39534	108 aa		3	□□□□□ -1.93
CKA1	YIL035C	SYG1	P40528	902 aa		3	□□□□□ -1.93
CKA1	YIL035C	SVL3	Q03088	825 aa	Known RBP	3	□□□□□ -1.93
CKA1	YIL035C	TSR1	Q07381	788 aa	Known RBP	3	□□□□□ -1.93
CKA1	YIL035C	RBD2	Q12270	262 aa		3	□□□□□ -1.93
CKA1	YIL035C	SLG1	P54867	378 aa		2.99	□□□□□ -1.93
CKA1	YIL035C	MFB1	Q04922	465 aa		2.99	□□□□□ -1.93
CKA1	YIL035C	PRD1	P25375	712 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	CDC60	P26637	1090 aa	Known RBP	2.98	□□□□□ -1.93
CKA1	YIL035C	RSM22	P36056	628 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	SLX1	P38324	304 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	ERP2	P39704	215 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	YMR147W	P40218	223 aa	Known RBP	2.98	□□□□□ -1.93
CKA1	YIL035C	POP6	P53218	158 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	TOF1	P53840	1238 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	FIN1	Q03898	291 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	RAV1	P47104	1357 aa		2.98	□□□□□ -1.93
CKA1	YIL035C	CRM1	P30822	1084 aa	Known RBP	2.97	□□□□□ -1.93
CKA1	YIL035C	PAH1	P32567	862 aa		2.97	□□□□□ -1.93
CKA1	YIL035C	WBP1	P33767	430 aa	Known RBP	2.97	□□□□□ -1.93
CKA1	YIL035C	OGG1	P53397	376 aa	Predicted RBP	2.97	□□□□□ -1.93
CKA1	YIL035C	GOR1	P53839	350 aa		2.97	□□□□□ -1.93
CKA1	YIL035C	YJR112W-A	Q3E743	109 aa		2.97	□□□□□ -1.93
CKA1	YIL035C	BRR1	Q99177	341 aa	Predicted RBP	2.97	□□□□□ -1.93
CKA1	YIL035C	GAL80	P04387	435 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	SSH4	P32343	579 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	TRS85	P46944	698 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	MRX6	P48564	524 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	IBD2	P53892	351 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	VPS38	Q05919	439 aa		2.96	□□□□□ -1.94
CKA1	YIL035C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
CKA1	YIL035C	YLR108C	Q12259	485 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms