RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SYC1Q08553 188 aaPredicted RBP5.58□□□□□ -1.52
SFB3YHR098C ESA1Q08649 445 aa5.58□□□□□ -1.52
SFB3YHR098C PRC1P00729 532 aa5.57□□□□□ -1.52
SFB3YHR098C RAD7P06779 565 aa5.57□□□□□ -1.52
SFB3YHR098C FPS1P23900 669 aa5.57□□□□□ -1.52
SFB3YHR098C SRO9P25567 434 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C CAM1P29547 415 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C MSS1P32559 526 aaPredicted RBP5.57□□□□□ -1.52
SFB3YHR098C TMT1P32643 299 aa5.57□□□□□ -1.52
SFB3YHR098C MIA40P36046 403 aa5.57□□□□□ -1.52
SFB3YHR098C YBL029WP38201 376 aa5.57□□□□□ -1.52
SFB3YHR098C SUL1P38359 859 aa5.57□□□□□ -1.52
SFB3YHR098C YHR218WP38899 603 aa5.57□□□□□ -1.52
SFB3YHR098C IPT1P38954 527 aa5.57□□□□□ -1.52
SFB3YHR098C PLB1P39105 664 aa5.57□□□□□ -1.52
SFB3YHR098C DSS1P39112 969 aa5.57□□□□□ -1.52
SFB3YHR098C SOP4P39543 234 aaPredicted RBP5.57□□□□□ -1.52
SFB3YHR098C CPR7P47103 393 aa5.57□□□□□ -1.52
SFB3YHR098C YGR026WP53217 278 aa5.57□□□□□ -1.52
SFB3YHR098C SOL4P53315 255 aa5.57□□□□□ -1.52
SFB3YHR098C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SFB3YHR098C THI7Q05998 598 aa5.57□□□□□ -1.52
SFB3YHR098C TRM10Q12400 293 aa5.57□□□□□ -1.52
SFB3YHR098C FLP1P03870 423 aa5.57□□□□□ -1.52
SFB3YHR098C INO1P11986 533 aa5.57□□□□□ -1.52
SFB3YHR098C TRX1P22217 103 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C ZRT3P34240 503 aa5.57□□□□□ -1.52
SFB3YHR098C CST26P38226 397 aa5.57□□□□□ -1.52
SFB3YHR098C NDT80P38830 627 aa5.57□□□□□ -1.52
SFB3YHR098C YHR131CP38835 850 aa5.57□□□□□ -1.52
SFB3YHR098C VMA13P41807 478 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C ALR2P43553 858 aa5.57□□□□□ -1.52
SFB3YHR098C LSM8P47093 109 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C ASN2P49090 572 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C PBP1P53297 722 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C YMR279CQ03263 540 aa5.57□□□□□ -1.52
SFB3YHR098C LYS21Q12122 440 aaKnown RBP5.57□□□□□ -1.52
SFB3YHR098C NSL1Q12143 216 aa5.57□□□□□ -1.52
SFB3YHR098C HAL9Q12180 1030 aa5.57□□□□□ -1.52
SFB3YHR098C RBD2Q12270 262 aa5.57□□□□□ -1.52
SFB3YHR098C DGK1Q12382 290 aa5.57□□□□□ -1.52
SFB3YHR098C UBR2Q07963 1872 aa5.56□□□□□ -1.52
SFB3YHR098C TIM9O74700 87 aa5.56□□□□□ -1.52
SFB3YHR098C ARO3P14843 370 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C YCL049CP25577 312 aa5.56□□□□□ -1.52
SFB3YHR098C NTG1P31378 399 aa5.56□□□□□ -1.52
SFB3YHR098C YKL100CP34248 587 aa5.56□□□□□ -1.52
SFB3YHR098C BAP2P38084 609 aa5.56□□□□□ -1.52
SFB3YHR098C MAK5P38112 773 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C YHR202WP38887 602 aa5.56□□□□□ -1.52
SFB3YHR098C FAD1P38913 306 aa5.56□□□□□ -1.52
SFB3YHR098C PRM2P40534 656 aa5.56□□□□□ -1.52
SFB3YHR098C QRI1P43123 477 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C BUD13P46947 266 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C AIF1P52923 378 aa5.56□□□□□ -1.52
SFB3YHR098C DAM1P53267 343 aa5.56□□□□□ -1.52
SFB3YHR098C SRP1Q02821 542 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C ELP3Q02908 557 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C YMR155WQ03795 547 aa5.56□□□□□ -1.52
SFB3YHR098C TRM12Q04235 462 aa5.56□□□□□ -1.52
SFB3YHR098C YDL124WQ07551 312 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C SKI7Q08491 747 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C YGK3Q12222 375 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C YOR012WQ12351 137 aa5.56□□□□□ -1.52
SFB3YHR098C BAR1P12630 587 aa5.56□□□□□ -1.52
SFB3YHR098C RAM1P22007 431 aa5.56□□□□□ -1.52
SFB3YHR098C URA10P30402 227 aa5.56□□□□□ -1.52
SFB3YHR098C PET309P32522 965 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C SSO2P39926 295 aa5.56□□□□□ -1.52
SFB3YHR098C YER184CP39961 794 aa5.56□□□□□ -1.52
SFB3YHR098C ICP55P40051 511 aa5.56□□□□□ -1.52
SFB3YHR098C EMP65P40085 556 aa5.56□□□□□ -1.52
SFB3YHR098C MRPS18P42847 217 aa5.56□□□□□ -1.52
SFB3YHR098C HXT16P47185 567 aa5.56□□□□□ -1.52
SFB3YHR098C RAD17P48581 401 aa5.56□□□□□ -1.52
SFB3YHR098C SUT1P53032 299 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C RRT6P53117 311 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C YAT1P80235 687 aa5.56□□□□□ -1.52
SFB3YHR098C SNP1Q00916 300 aaPredicted RBP5.56□□□□□ -1.52
SFB3YHR098C PEX12Q04370 399 aa5.56□□□□□ -1.52
SFB3YHR098C TIF6Q12522 245 aaKnown RBP5.56□□□□□ -1.52
SFB3YHR098C HBN1Q96VH4 193 aa5.56□□□□□ -1.52
SFB3YHR098C ERG6P25087 383 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C PXA2P34230 853 aa5.55□□□□□ -1.52
SFB3YHR098C APT2P36973 181 aa5.55□□□□□ -1.52
SFB3YHR098C SBE22P38814 852 aa5.55□□□□□ -1.52
SFB3YHR098C CKB2P38930 258 aa5.55□□□□□ -1.52
SFB3YHR098C ACA1P39970 489 aa5.55□□□□□ -1.52
SFB3YHR098C BST1P43571 1029 aa5.55□□□□□ -1.52
SFB3YHR098C RET2P43621 546 aa5.55□□□□□ -1.52
SFB3YHR098C RPT4P53549 437 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C YDR541CQ03049 344 aa5.55□□□□□ -1.52
SFB3YHR098C SNZ1Q03148 297 aa5.55□□□□□ -1.52
SFB3YHR098C BCH1Q05029 724 aa5.55□□□□□ -1.52
SFB3YHR098C NEJ1Q06148 342 aa5.55□□□□□ -1.52
SFB3YHR098C HDA2Q06629 674 aa5.55□□□□□ -1.52
SFB3YHR098C NBA1Q08229 501 aaKnown RBP5.55□□□□□ -1.52
SFB3YHR098C TRE2Q08693 809 aa5.55□□□□□ -1.52
SFB3YHR098C HFI1Q12060 488 aa5.55□□□□□ -1.52
SFB3YHR098C SIR3P06701 978 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms