RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	ASG7	P46993	209 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	IML2	P47031	731 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	LIA1	P47120	325 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	IMD4	P50094	524 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	PSP1	P50896	841 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	PEF1	P53238	335 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	YPR003C	P53394	754 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	COP1	P53622	1201 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	ESF2	P53743	316 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	VPS9	P54787	451 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	CIK1	Q01649	594 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	SVL3	Q03088	825 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	YML131W	Q03102	365 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	YMR111C	Q04461	462 aa	Predicted RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	ASM4	Q05166	528 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	YPS7	Q06325	596 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	STP4	Q07351	490 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	AAD4	Q07747	329 aa		4.16	□□□□□ -1.74
LSB1	YGR136W	DIA2	Q08496	732 aa	Predicted RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	SPE3	Q12074	293 aa	Known RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	BRR1	Q99177	341 aa	Predicted RBP	4.16	□□□□□ -1.74
LSB1	YGR136W	FMP27	Q06179	2628 aa		4.15	□□□□□ -1.74
LSB1	YGR136W	REP1	P03871	373 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	SSC1	P0CS90	654 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	MTF1	P14908	341 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	REC107	P21651	314 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	SGF29	P25554	259 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	HIR2	P32480	875 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	YBR062C	P38239	180 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	SMF2	P38778	549 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	RPP1	P38786	293 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	FHL1	P39521	936 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	PRM9	P39551	298 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	STB2	P46679	850 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	YJL132W	P47014	750 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	BIT61	P47041	543 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	AMA1	P50082	593 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	YNL058C	P53947	316 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	ELP3	Q02908	557 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	YAP6	Q03935	383 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	CTK1	Q03957	528 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	SPG3	Q04398	127 aa	Predicted RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	AIM32	Q04689	311 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	GRX8	Q05926	109 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	ECM22	Q05958	814 aa	Predicted RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
LSB1	YGR136W	AAD15	Q08361	143 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	CUE5	Q08412	411 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	YPQ1	Q12010	308 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	HOS1	Q12214	470 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	GPM3	Q12326	303 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	SCM3	Q12334	223 aa		4.15	□□□□□ -1.75
LSB1	YGR136W	EFG1	Q3E705	233 aa	Known RBP	4.15	□□□□□ -1.75
LSB1	YGR136W	PWP1	P21304	576 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	SIR1	P21691	654 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	PPH22	P23595	377 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	DPB2	P24482	689 aa	Predicted RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	BUD23	P25627	275 aa	Predicted RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	PMI40	P29952	429 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	URA10	P30402	227 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	HXT3	P32466	567 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	RPC34	P32910	317 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	UTP11	P34247	250 aa	Predicted RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	NUP120	P35729	1037 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	YKR015C	P36111	568 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	ETR1	P38071	380 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	APM3	P38153	483 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	YBR032W	P38223	100 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	YHR112C	P38716	378 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	MSS4	P38994	779 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	SWD1	P39706	426 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	YIL161W	P40449	235 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	DPH1	P40487	425 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	BUD8	P41698	603 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	ERR3	P42222	437 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	RRT5	P43607	289 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	TAH11	P47112	604 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	MNN10	P50108	393 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	TAF6	P53040	516 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	ART5	P53244	586 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	RCF2	P53721	224 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	KTR6	P54070	446 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	HRD3	Q05787	833 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	ADE13	Q05911	482 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	YLR224W	Q05947	369 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	BSP1	Q06604	576 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	NSE1	Q07913	336 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	IRC10	Q08118	586 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	NRT1	Q08485	598 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	YLR053C	Q12026	108 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	NTO1	Q12311	748 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	PDH1	Q12428	516 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	APC2	Q12440	853 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	POM34	Q12445	299 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	HTZ1	Q12692	134 aa	Known RBP	4.14	□□□□□ -1.75
LSB1	YGR136W	AI5_ALPHA	Q9ZZX1	630 aa		4.14	□□□□□ -1.75
LSB1	YGR136W	TEF1	P02994	458 aa	Known RBP	4.13	□□□□□ -1.75
LSB1	YGR136W	RPS14A	P06367	137 aa	Known RBP	4.13	□□□□□ -1.75
LSB1	YGR136W	LAT1	P12695	482 aa	Known RBP	4.13	□□□□□ -1.75
LSB1	YGR136W	THR1	P17423	357 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 113.9 ms