RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C BAG7Q12128 409 aa2.22□□□□□ -2.05
PRE4YFR050C COX17Q12287 69 aa2.22□□□□□ -2.05
PRE4YFR050C TMA7Q3E764 64 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C ILV2P07342 687 aaKnown RBP2.21□□□□□ -2.06
PRE4YFR050C RRP43P25359 394 aaPredicted RBP2.21□□□□□ -2.06
PRE4YFR050C RPF2P36160 344 aaKnown RBP2.21□□□□□ -2.06
PRE4YFR050C AGP2P38090 596 aa2.21□□□□□ -2.06
PRE4YFR050C ARB1P40024 610 aaKnown RBP2.21□□□□□ -2.06
PRE4YFR050C RAD26P40352 1085 aa2.21□□□□□ -2.06
PRE4YFR050C MNT3P40549 630 aa2.21□□□□□ -2.06
PRE4YFR050C IRC7P43623 340 aa2.21□□□□□ -2.06
PRE4YFR050C RPC17P47076 161 aa2.21□□□□□ -2.06
PRE4YFR050C GIS2P53849 153 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
PRE4YFR050C SHS1Q07657 551 aa2.21□□□□□ -2.06
PRE4YFR050C CRC1Q12289 327 aa2.21□□□□□ -2.06
PRE4YFR050C YDR262WQ12331 272 aa2.21□□□□□ -2.06
PRE4YFR050C ARP7Q12406 477 aa2.21□□□□□ -2.06
PRE4YFR050C YMR085WP0CF18 432 aa2.2□□□□□ -2.06
PRE4YFR050C CLN3P13365 580 aa2.2□□□□□ -2.06
PRE4YFR050C PMS1P14242 873 aa2.2□□□□□ -2.06
PRE4YFR050C POL30P15873 258 aaKnown RBP2.2□□□□□ -2.06
PRE4YFR050C COQ3P27680 312 aa2.2□□□□□ -2.06
PRE4YFR050C SGE1P33335 543 aa2.2□□□□□ -2.06
PRE4YFR050C PXA2P34230 853 aa2.2□□□□□ -2.06
PRE4YFR050C TOM20P35180 183 aa2.2□□□□□ -2.06
PRE4YFR050C ERC1P38767 581 aa2.2□□□□□ -2.06
PRE4YFR050C GAT2P40209 560 aa2.2□□□□□ -2.06
PRE4YFR050C YIL024CP40543 189 aa2.2□□□□□ -2.06
PRE4YFR050C ZIM17P42844 174 aa2.2□□□□□ -2.06
PRE4YFR050C ELP2P42935 788 aa2.2□□□□□ -2.06
PRE4YFR050C PUS4P48567 403 aaKnown RBP2.2□□□□□ -2.06
PRE4YFR050C EMC4P53073 190 aa2.2□□□□□ -2.06
PRE4YFR050C COG7P53195 279 aa2.2□□□□□ -2.06
PRE4YFR050C CUL3P53202 744 aa2.2□□□□□ -2.06
PRE4YFR050C ESF2P53743 316 aaKnown RBP2.2□□□□□ -2.06
PRE4YFR050C PIR3Q03180 325 aa2.2□□□□□ -2.06
PRE4YFR050C ARA2Q04212 335 aa2.2□□□□□ -2.06
PRE4YFR050C PIN3Q06449 215 aa2.2□□□□□ -2.06
PRE4YFR050C TSR1Q07381 788 aaKnown RBP2.2□□□□□ -2.06
PRE4YFR050C YPL191CQ08930 360 aa2.2□□□□□ -2.06
PRE4YFR050C YOL114CQ12322 202 aa2.2□□□□□ -2.06
PRE4YFR050C SST2P11972 698 aaKnown RBP2.19□□□□□ -2.06
PRE4YFR050C SCL1P21243 252 aaKnown RBP2.19□□□□□ -2.06
PRE4YFR050C CBF2P32504 956 aa2.19□□□□□ -2.06
PRE4YFR050C ATO2P32907 282 aa2.19□□□□□ -2.06
PRE4YFR050C KES1P35844 434 aaKnown RBP2.19□□□□□ -2.06
PRE4YFR050C SCO2P38072 301 aa2.19□□□□□ -2.06
PRE4YFR050C SPC97P38863 823 aa2.19□□□□□ -2.06
PRE4YFR050C FLO5P38894 1075 aa2.19□□□□□ -2.06
PRE4YFR050C CAB2P40506 365 aa2.19□□□□□ -2.06
PRE4YFR050C PCI8P40512 444 aa2.19□□□□□ -2.06
PRE4YFR050C MAD3P47074 515 aa2.19□□□□□ -2.06
PRE4YFR050C PEX8P53248 589 aa2.19□□□□□ -2.06
PRE4YFR050C RTS3P53289 263 aa2.19□□□□□ -2.06
PRE4YFR050C SCW4P53334 386 aaKnown RBP2.19□□□□□ -2.06
PRE4YFR050C TEP1P53916 434 aa2.19□□□□□ -2.06
PRE4YFR050C YPL108WQ02872 168 aaPredicted RBP2.19□□□□□ -2.06
PRE4YFR050C AIM6Q07716 390 aa2.19□□□□□ -2.06
PRE4YFR050C TAH18Q12181 623 aa2.19□□□□□ -2.06
PRE4YFR050C YPR089WO13585 888 aa2.18□□□□□ -2.06
PRE4YFR050C MAK31P23059 88 aa2.18□□□□□ -2.06
PRE4YFR050C GCD7P32502 381 aaPredicted RBP2.18□□□□□ -2.06
PRE4YFR050C APM3P38153 483 aa2.18□□□□□ -2.06
PRE4YFR050C VBA2P38358 474 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C IMD2P38697 523 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C TDA11P38854 504 aa2.18□□□□□ -2.06
PRE4YFR050C YDR089WP38966 869 aa2.18□□□□□ -2.06
PRE4YFR050C VPS27P40343 622 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C CIN1P40987 1014 aa2.18□□□□□ -2.06
PRE4YFR050C IMD3P50095 523 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C COP1P53622 1201 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C ASI1P54074 624 aa2.18□□□□□ -2.06
PRE4YFR050C TGL2P54857 326 aa2.18□□□□□ -2.06
PRE4YFR050C ATG21Q02887 496 aa2.18□□□□□ -2.06
PRE4YFR050C NUP53Q03790 475 aa2.18□□□□□ -2.06
PRE4YFR050C MRPL1Q04599 285 aa2.18□□□□□ -2.06
PRE4YFR050C BRE1Q07457 700 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
PRE4YFR050C YLR030WQ07967 263 aa2.18□□□□□ -2.06
PRE4YFR050C GEP3Q08622 556 aa2.18□□□□□ -2.06
PRE4YFR050C LYS21Q12122 440 aaKnown RBP2.18□□□□□ -2.06
PRE4YFR050C AMD1P15274 810 aaKnown RBP2.17□□□□□ -2.06
PRE4YFR050C DAL5P15365 543 aa2.17□□□□□ -2.06
PRE4YFR050C IMG1P25626 169 aa2.17□□□□□ -2.06
PRE4YFR050C PTC6P25646 442 aa2.17□□□□□ -2.06
PRE4YFR050C LAC1P28496 418 aa2.17□□□□□ -2.06
PRE4YFR050C ASK1P35734 292 aa2.17□□□□□ -2.06
PRE4YFR050C ARA1P38115 344 aa2.17□□□□□ -2.06
PRE4YFR050C MMS4P38257 691 aa2.17□□□□□ -2.06
PRE4YFR050C YHR054CP38780 354 aa2.17□□□□□ -2.06
PRE4YFR050C YAL037WP39728 267 aa2.17□□□□□ -2.06
PRE4YFR050C SHQ1P40486 507 aaPredicted RBP2.17□□□□□ -2.06
PRE4YFR050C ORC5P50874 479 aa2.17□□□□□ -2.06
PRE4YFR050C YGR079WP53249 370 aa2.17□□□□□ -2.06
PRE4YFR050C YNL144CP53907 740 aa2.17□□□□□ -2.06
PRE4YFR050C MET14Q02196 202 aa2.17□□□□□ -2.06
PRE4YFR050C PDS5Q04264 1277 aa2.17□□□□□ -2.06
PRE4YFR050C MLC2Q06580 163 aa2.17□□□□□ -2.06
PRE4YFR050C RAD34Q06665 692 aa2.17□□□□□ -2.06
PRE4YFR050C IWR1Q07532 353 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms