RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C BI2P03873 423 aa4□□□□□ -1.77
SPB4YFL002C KIN3P22209 435 aa4□□□□□ -1.77
SPB4YFL002C UBA1P22515 1024 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C SGV1P23293 657 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C DMC1P25453 334 aa4□□□□□ -1.77
SPB4YFL002C KRE2P27809 442 aa4□□□□□ -1.77
SPB4YFL002C MSS51P32335 436 aa4□□□□□ -1.77
SPB4YFL002C PPQ1P32945 549 aa4□□□□□ -1.77
SPB4YFL002C RIB7P33312 244 aa4□□□□□ -1.77
SPB4YFL002C TRM2P33753 639 aa4□□□□□ -1.77
SPB4YFL002C VHC1P38329 1120 aa4□□□□□ -1.77
SPB4YFL002C UBA4P38820 440 aa4□□□□□ -1.77
SPB4YFL002C YHR218WP38899 603 aa4□□□□□ -1.77
SPB4YFL002C YMR147WP40218 223 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C IMD3P50095 523 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C RMD9P53140 646 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C COP1P53622 1201 aaKnown RBP4□□□□□ -1.77
SPB4YFL002C VTC3Q02725 835 aa4□□□□□ -1.77
SPB4YFL002C NDL1Q06568 189 aa4□□□□□ -1.77
SPB4YFL002C BRR1Q99177 341 aaPredicted RBP4□□□□□ -1.77
SPB4YFL002C PDE2P06776 526 aa3.99□□□□□ -1.77
SPB4YFL002C DBP3P20447 523 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C CNA1P23287 553 aa3.99□□□□□ -1.77
SPB4YFL002C SAT4P25333 603 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C GSY2P27472 705 aa3.99□□□□□ -1.77
SPB4YFL002C PHO91P27514 894 aa3.99□□□□□ -1.77
SPB4YFL002C NDI1P32340 513 aa3.99□□□□□ -1.77
SPB4YFL002C SSE1P32589 693 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C ELM1P32801 640 aa3.99□□□□□ -1.77
SPB4YFL002C EBP2P36049 427 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C TCM62P38228 572 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C KEL1P38853 1164 aaKnown RBP3.99□□□□□ -1.77
SPB4YFL002C STB4P50104 949 aa3.99□□□□□ -1.77
SPB4YFL002C OCA2P53949 197 aa3.99□□□□□ -1.77
SPB4YFL002C TIM44Q01852 431 aa3.99□□□□□ -1.77
SPB4YFL002C RBA50Q04418 439 aa3.99□□□□□ -1.77
SPB4YFL002C AQY1P0CD91 305 aa3.98□□□□□ -1.77
SPB4YFL002C PMR1P13586 950 aa3.98□□□□□ -1.77
SPB4YFL002C OM45P16547 393 aa3.98□□□□□ -1.77
SPB4YFL002C NUP1P20676 1076 aa3.98□□□□□ -1.77
SPB4YFL002C BEM1P29366 551 aa3.98□□□□□ -1.77
SPB4YFL002C SIN4P32259 974 aa3.98□□□□□ -1.77
SPB4YFL002C YMC1P32331 307 aa3.98□□□□□ -1.77
SPB4YFL002C OCT1P35999 772 aa3.98□□□□□ -1.77
SPB4YFL002C YKL023WP36103 277 aaKnown RBP3.98□□□□□ -1.77
SPB4YFL002C BNA4P38169 460 aa3.98□□□□□ -1.77
SPB4YFL002C SDS3P40505 327 aa3.98□□□□□ -1.77
SPB4YFL002C ELP2P42935 788 aa3.98□□□□□ -1.77
SPB4YFL002C SNG1P46950 547 aa3.98□□□□□ -1.77
SPB4YFL002C RPA34P47006 233 aaPredicted RBP3.98□□□□□ -1.77
SPB4YFL002C YJL043WP47053 257 aa3.98□□□□□ -1.77
SPB4YFL002C ORC5P50874 479 aa3.98□□□□□ -1.77
SPB4YFL002C CWC22P53333 577 aaKnown RBP3.98□□□□□ -1.77
SPB4YFL002C ASI1P54074 624 aa3.98□□□□□ -1.77
SPB4YFL002C PDR8Q06149 701 aa3.98□□□□□ -1.77
SPB4YFL002C POS5Q06892 414 aa3.98□□□□□ -1.77
SPB4YFL002C MCH4Q08268 501 aa3.98□□□□□ -1.77
SPB4YFL002C YOR365CQ08844 703 aa3.98□□□□□ -1.77
SPB4YFL002C ULA1Q12059 462 aa3.98□□□□□ -1.77
SPB4YFL002C SNF3P10870 884 aa3.98□□□□□ -1.77
SPB4YFL002C ATP10P18496 279 aa3.98□□□□□ -1.77
SPB4YFL002C CDC43P18898 376 aa3.98□□□□□ -1.77
SPB4YFL002C RIM1P32445 135 aaKnown RBP3.98□□□□□ -1.77
SPB4YFL002C YER130CP39959 443 aa3.98□□□□□ -1.77
SPB4YFL002C CIN1P40987 1014 aa3.98□□□□□ -1.77
SPB4YFL002C ZPR1P53303 486 aaKnown RBP3.98□□□□□ -1.77
SPB4YFL002C ARP5P53946 755 aa3.98□□□□□ -1.77
SPB4YFL002C MDM30Q05930 598 aa3.98□□□□□ -1.77
SPB4YFL002C PIG1Q06216 648 aa3.98□□□□□ -1.77
SPB4YFL002C RRD2Q12461 358 aa3.98□□□□□ -1.77
SPB4YFL002C RHB1P25378 209 aa3.97□□□□□ -1.77
SPB4YFL002C RDS1P25611 832 aa3.97□□□□□ -1.77
SPB4YFL002C DUG2P38149 878 aa3.97□□□□□ -1.77
SPB4YFL002C PCA1P38360 1216 aa3.97□□□□□ -1.77
SPB4YFL002C RFC3P38629 340 aa3.97□□□□□ -1.77
SPB4YFL002C MKT1P40850 830 aaKnown RBP3.97□□□□□ -1.77
SPB4YFL002C TFG2P41896 400 aaPredicted RBP3.97□□□□□ -1.77
SPB4YFL002C DRN1P53255 507 aaKnown RBP3.97□□□□□ -1.77
SPB4YFL002C DUG3P53871 357 aa3.97□□□□□ -1.77
SPB4YFL002C SNU56Q03782 492 aaKnown RBP3.97□□□□□ -1.77
SPB4YFL002C YMR111CQ04461 462 aaPredicted RBP3.97□□□□□ -1.77
SPB4YFL002C TMN2Q04562 672 aa3.97□□□□□ -1.77
SPB4YFL002C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SPB4YFL002C RDL1Q12305 139 aaKnown RBP3.97□□□□□ -1.77
SPB4YFL002C ILV5P06168 395 aaKnown RBP3.96□□□□□ -1.78
SPB4YFL002C SEC63P14906 663 aa3.96□□□□□ -1.78
SPB4YFL002C ALG1P16661 449 aa3.96□□□□□ -1.78
SPB4YFL002C PRP21P32524 280 aaPredicted RBP3.96□□□□□ -1.78
SPB4YFL002C MSN2P33748 704 aa3.96□□□□□ -1.78
SPB4YFL002C ROT2P38138 954 aa3.96□□□□□ -1.78
SPB4YFL002C ARN1P38731 627 aa3.96□□□□□ -1.78
SPB4YFL002C YIL060WP40519 144 aa3.96□□□□□ -1.78
SPB4YFL002C SUN4P53616 420 aa3.96□□□□□ -1.78
SPB4YFL002C EAF7P53911 425 aaKnown RBP3.96□□□□□ -1.78
SPB4YFL002C KTR5P53966 522 aaPredicted RBP3.96□□□□□ -1.78
SPB4YFL002C UTP6Q02354 440 aaKnown RBP3.96□□□□□ -1.78
SPB4YFL002C SMA1Q02651 245 aa3.96□□□□□ -1.78
SPB4YFL002C PHO92Q06390 306 aa3.96□□□□□ -1.78
SPB4YFL002C COX3P00420 269 aa3.95□□□□□ -1.78
SPB4YFL002C SCEIP03882 235 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms