RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	CTK2	P46962	323 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	RBG2	P53295	368 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	IST1	P53843	298 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	RIP-Chip
VMA8	YEL051W	SMA1	Q02651	245 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	NGL3	Q03210	505 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	RTN1	Q04947	295 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	LOT6	Q07923	191 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	YOL159C	Q08300	171 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	CUE5	Q08412	411 aa	Known RBP	3.09	□□□□□ -1.91
VMA8	YEL051W	ADF1	Q2V2Q1	113 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	YMR230W-A	Q3E7B5	62 aa		3.09	□□□□□ -1.91
VMA8	YEL051W	MET8	P15807	274 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	PRD1	P25375	712 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	SEC1	P30619	724 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	SAC1	P32368	623 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	SMI1	P32566	505 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	DOA4	P32571	926 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	RAD24	P32641	659 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	SSO1	P32867	290 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	PDR3	P33200	976 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	NUF2	P33895	451 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	AGP2	P38090	596 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	YBR225W	P38321	900 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	HXT9	P40885	567 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	PHB1	P40961	287 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	ATG27	P46989	271 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	DPB11	P47027	764 aa	Predicted RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	ABM1	P47146	123 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	MLC1	P53141	149 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	SGF73	P53165	657 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	YGR067C	P53243	804 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	RPT6	Q01939	405 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	YML037C	Q03703	340 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	PRP42	Q03776	544 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	BUD22	Q04347	519 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	DPB4	Q04603	196 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	VAC14	Q06708	880 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	AHC1	Q12433	566 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	SEC39	Q12745	709 aa		3.08	□□□□□ -1.92
VMA8	YEL051W	LSO2	Q3E772	92 aa	Known RBP	3.08	□□□□□ -1.92
VMA8	YEL051W	RAP1	P11938	827 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SPE2	P21182	396 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	MNE1	P24720	663 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SGF29	P25554	259 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	BMH1	P29311	267 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	PDB1	P32473	366 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	SAC6	P32599	642 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	YEL043W	P32618	956 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	MGM101	P32787	269 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	YUH1	P35127	236 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YPT52	P36018	234 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	RTC3	P38804	111 aa	Predicted RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	SNZ3	P43545	298 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	RPN11	P43588	306 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	LIA1	P47120	325 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	DIA3	P52290	468 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	CUL3	P53202	744 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YGR266W	P53326	701 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SNZ2	P53824	298 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	TIM10	P87108	93 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	RPM2	Q02773	1202 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	INA17	Q02888	182 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	CTL1	Q03220	320 aa	Known RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	EKI1	Q03764	534 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SYF1	Q04048	859 aa	Predicted RBP	3.07	□□□□□ -1.92
VMA8	YEL051W	TAF11	Q04226	346 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	MFB1	Q04922	465 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SCW10	Q04951	389 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	VIK1	Q12045	647 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	INP53	Q12271	1107 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	SCM3	Q12334	223 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	AVL9	Q12500	764 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	RAD50	P12753	1312 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YRF1-4	O13559	1382 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YML133C	Q03099	1374 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YLL067C	Q07888	1374 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	YLL066C	Q99208	1374 aa		3.07	□□□□□ -1.92
VMA8	YEL051W	GCN4	P03069	281 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	ARD1	P07347	238 aa	Predicted RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	KRS1	P15180	591 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	CDC42	P19073	191 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	OLE1	P21147	510 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	OSM1	P21375	501 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	CLB2	P24869	491 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	CDC10	P25342	322 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	OCA4	P25366	362 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	YIH1	P25637	258 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	TPS2	P31688	896 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	MDL1	P33310	695 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	POP7	P38291	140 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	PEX32	P38292	413 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	MSG5	P38590	489 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	DIA4	P38705	446 aa	Predicted RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	YNG2	P38806	282 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	FLC2	P39719	783 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	AGE2	P40529	298 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	MKT1	P40850	830 aa	Known RBP	3.06	□□□□□ -1.92
VMA8	YEL051W	MRX6	P48564	524 aa		3.06	□□□□□ -1.92
VMA8	YEL051W	TOM22	P49334	152 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms