RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	COQ3	P27680	312 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	CWP1	P28319	239 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	FLO5	P38894	1075 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	KAP123	P40069	1113 aa	Known RBP	3.01	□□□□□ -1.93
VAC8	YEL013W	CDC1	P40986	491 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	EPL1	P43572	832 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	SMC3	P47037	1230 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	YJR054W	P47114	497 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	CPR6	P53691	371 aa	Known RBP	3.01	□□□□□ -1.93
VAC8	YEL013W	MPS1	P54199	764 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	YDR109C	Q04585	715 aa		3.01	□□□□□ -1.93
VAC8	YEL013W	LYS21	Q12122	440 aa	Known RBP	3.01	□□□□□ -1.93
VAC8	YEL013W	YPR089W	O13585	888 aa		3	□□□□□ -1.93
VAC8	YEL013W	LAC1	P28496	418 aa		3	□□□□□ -1.93
VAC8	YEL013W	ARP2	P32381	391 aa	Known RBP	3	□□□□□ -1.93
VAC8	YEL013W	GSH1	P32477	678 aa		3	□□□□□ -1.93
VAC8	YEL013W	CTM1	P38818	585 aa		3	□□□□□ -1.93
VAC8	YEL013W	ELO1	P39540	310 aa		3	□□□□□ -1.93
VAC8	YEL013W	CFD1	P40558	293 aa		3	□□□□□ -1.93
VAC8	YEL013W	RSC1	P53236	928 aa		3	□□□□□ -1.93
VAC8	YEL013W	COP1	P53622	1201 aa	Known RBP	3	□□□□□ -1.93
VAC8	YEL013W	MZM1	Q03429	123 aa	Predicted RBP	3	□□□□□ -1.93
VAC8	YEL013W	VMS1	Q04311	632 aa	Known RBP	3	□□□□□ -1.93
VAC8	YEL013W	EIS1	Q05050	843 aa	Known RBP	3	□□□□□ -1.93
VAC8	YEL013W	VID22	Q05934	901 aa		3	□□□□□ -1.93
VAC8	YEL013W	APC5	Q08683	685 aa		3	□□□□□ -1.93
VAC8	YEL013W	HSP42	Q12329	375 aa		3	□□□□□ -1.93
VAC8	YEL013W	SUC2	P00724	532 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	PHO81	P17442	1178 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	TRX2	P22803	104 aa	Known RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	CLB4	P24871	460 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	MUD1	P32605	298 aa	Known RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	PMT1	P33775	817 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	PXA2	P34230	853 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	IES5	P40060	125 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	UBP7	P40453	1071 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	YGR079W	P53249	370 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	MTG1	Q03151	367 aa	Predicted RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	MRPL1	Q04599	285 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	DON1	Q05610	365 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	GEP3	Q08622	556 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	GET3	Q12154	354 aa	Known RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	YOR097C	Q12274	175 aa	Predicted RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	SEF1	P34228	1148 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	HES1	P35843	434 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	SCO2	P38072	301 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	RRP3	P38712	501 aa	Known RBP	2.99	□□□□□ -1.93
VAC8	YEL013W	SPC72	P39723	622 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	PUG1	P40100	303 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	RSM25	P40496	264 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	LCB2	P40970	561 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	MRX6	P48564	524 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	RTC4	P53850	401 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	VHS1	Q03785	461 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	YLR012C	Q07927	99 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	DDC1	Q08949	612 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	HER1	Q12276	1246 aa		2.99	□□□□□ -1.93
VAC8	YEL013W	FSH1	P38777	243 aa	Known RBP	2.98	□□□□□ -1.93
VAC8	YEL013W	SPC97	P38863	823 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	FAU1	P40099	211 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	IMA1	P53051	589 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	YGR021W	P53212	290 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	SCW4	P53334	386 aa	Known RBP	2.98	□□□□□ -1.93
VAC8	YEL013W	PFA4	Q12006	378 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	GLE1	Q12315	538 aa		2.98	□□□□□ -1.93
VAC8	YEL013W	INH1	P01097	85 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	SPT15	P13393	240 aa	Known RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	CDC42	P19073	191 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	LRE1	P25579	583 aa	Known RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	DBF20	P32328	564 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	SWI3	P32591	825 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	MRS6	P32864	603 aa	Known RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	XRS2	P33301	854 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	MRPL36	P36531	177 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	SPG5	P42933	373 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	YJL107C	P42947	387 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	RTT101	P47050	842 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	YGL260W	P53056	76 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	YPR003C	P53394	754 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	PRM1	P53835	661 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	RPA49	Q01080	415 aa	Predicted RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	YDR131C	Q03899	556 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	RPC11	Q04307	110 aa	Predicted RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	AIM32	Q04689	311 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	GTB1	Q04924	702 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	BSC6	Q08280	497 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	ABP140	Q08641	628 aa	Known RBP	2.97	□□□□□ -1.93
VAC8	YEL013W	YLR046C	Q12253	270 aa		2.97	□□□□□ -1.93
VAC8	YEL013W	SUI3	P09064	285 aa	Known RBP	2.96	□□□□□ -1.93
VAC8	YEL013W	BIK1	P11709	440 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	POL30	P15873	258 aa	Known RBP	2.96	□□□□□ -1.93
VAC8	YEL013W	SEC62	P21825	274 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	PPH21	P23594	369 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	RRT12	P25381	491 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	GEX1	P25596	615 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	EFB1	P32471	206 aa	Known RBP	2.96	□□□□□ -1.93
VAC8	YEL013W	PTH2	P34222	208 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	NUP120	P35729	1037 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	GEX2	P36173	615 aa		2.96	□□□□□ -1.93
VAC8	YEL013W	NOP4	P37838	685 aa	Known RBP	2.96	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms