RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W NCA2Q12374 616 aa2.48□□□□□ -2.01
SNX41YDR425W PHO2P07269 559 aa2.48□□□□□ -2.01
SNX41YDR425W RPB2P08518 1224 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W OPI1P21957 404 aa2.48□□□□□ -2.01
SNX41YDR425W ERG8P24521 451 aa2.48□□□□□ -2.01
SNX41YDR425W BRF1P29056 596 aa2.48□□□□□ -2.01
SNX41YDR425W BMH1P29311 267 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W SIN4P32259 974 aa2.48□□□□□ -2.01
SNX41YDR425W RME1P32338 300 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W HXT1P32465 570 aa2.48□□□□□ -2.01
SNX41YDR425W RPN2P32565 945 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W MIA40P36046 403 aa2.48□□□□□ -2.01
SNX41YDR425W ARP1P38696 384 aa2.48□□□□□ -2.01
SNX41YDR425W BZZ1P38822 633 aa2.48□□□□□ -2.01
SNX41YDR425W PHO90P39535 881 aa2.48□□□□□ -2.01
SNX41YDR425W PFK26P40433 827 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W SAP185P40856 1058 aa2.48□□□□□ -2.01
SNX41YDR425W SAD1P43589 448 aa2.48□□□□□ -2.01
SNX41YDR425W YFR020WP43600 232 aa2.48□□□□□ -2.01
SNX41YDR425W AIP1P46680 615 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W ATG27P46989 271 aa2.48□□□□□ -2.01
SNX41YDR425W SHE4P51534 789 aa2.48□□□□□ -2.01
SNX41YDR425W SGF73P53165 657 aa2.48□□□□□ -2.01
SNX41YDR425W BTN2P53286 410 aa2.48□□□□□ -2.01
SNX41YDR425W YNL040WP53960 456 aaPredicted RBP2.48□□□□□ -2.01
SNX41YDR425W YKR005CQ02203 525 aa2.48□□□□□ -2.01
SNX41YDR425W MUB1Q03162 620 aa2.48□□□□□ -2.01
SNX41YDR425W EKI1Q03764 534 aa2.48□□□□□ -2.01
SNX41YDR425W PLP1Q04004 230 aa2.48□□□□□ -2.01
SNX41YDR425W PPM1Q04081 328 aa2.48□□□□□ -2.01
SNX41YDR425W YTH1Q06102 208 aaPredicted RBP2.48□□□□□ -2.01
SNX41YDR425W SIL1Q08199 421 aa2.48□□□□□ -2.01
SNX41YDR425W ALE1Q08548 619 aa2.48□□□□□ -2.01
SNX41YDR425W DUR1,2P32528 1835 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W RPL24AP04449 155 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W SRV2P17555 526 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W CLN1P20437 546 aa2.47□□□□□ -2.01
SNX41YDR425W MGR1P25573 417 aa2.47□□□□□ -2.01
SNX41YDR425W PDR3P33200 976 aa2.47□□□□□ -2.01
SNX41YDR425W UBC6P33296 250 aaPredicted RBP2.47□□□□□ -2.01
SNX41YDR425W TIF3P34167 436 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W RPC37P36121 282 aa2.47□□□□□ -2.01
SNX41YDR425W PSD1P39006 500 aa2.47□□□□□ -2.01
SNX41YDR425W SMX2P40204 77 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W YMR147WP40218 223 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W RTS2P40962 232 aa2.47□□□□□ -2.01
SNX41YDR425W FET5P43561 622 aa2.47□□□□□ -2.01
SNX41YDR425W YJR008WP47085 338 aa2.47□□□□□ -2.01
SNX41YDR425W DSL1P53847 754 aa2.47□□□□□ -2.01
SNX41YDR425W INA17Q02888 182 aa2.47□□□□□ -2.01
SNX41YDR425W YMR178WQ03219 274 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W SXM1Q04175 944 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W TMA64Q04600 565 aaKnown RBP2.47□□□□□ -2.01
SNX41YDR425W RCO1Q04779 684 aa2.47□□□□□ -2.01
SNX41YDR425W YLR352WQ06479 807 aa2.47□□□□□ -2.01
SNX41YDR425W NSE1Q07913 336 aa2.47□□□□□ -2.01
SNX41YDR425W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SNX41YDR425W TRM8Q12009 286 aa2.47□□□□□ -2.01
SNX41YDR425W MSH5Q12175 901 aa2.47□□□□□ -2.01
SNX41YDR425W YRF1-1P0CX20 1796 aa2.47□□□□□ -2.01
SNX41YDR425W YRF1-5P0CX21 1796 aa2.47□□□□□ -2.01
SNX41YDR425W YRF1-8P0CX22 1796 aa2.47□□□□□ -2.01
SNX41YDR425W SNF1P06782 633 aaKnown RBP2.46□□□□□ -2.02
SNX41YDR425W CLN3P13365 580 aa2.46□□□□□ -2.02
SNX41YDR425W SNA3P14359 133 aa2.46□□□□□ -2.02
SNX41YDR425W DPB2P24482 689 aaPredicted RBP2.46□□□□□ -2.02
SNX41YDR425W GID7P25569 745 aa2.46□□□□□ -2.02
SNX41YDR425W VPH2P32341 215 aa2.46□□□□□ -2.02
SNX41YDR425W EFB1P32471 206 aaKnown RBP2.46□□□□□ -2.02
SNX41YDR425W MRE11P32829 692 aa2.46□□□□□ -2.02
SNX41YDR425W OSH3P38713 996 aaKnown RBP2.46□□□□□ -2.02
SNX41YDR425W STN1P38960 494 aa2.46□□□□□ -2.02
SNX41YDR425W UIP3P39547 235 aa2.46□□□□□ -2.02
SNX41YDR425W RGI2P40188 164 aa2.46□□□□□ -2.02
SNX41YDR425W PDS1P40316 373 aaPredicted RBP2.46□□□□□ -2.02
SNX41YDR425W SYG1P40528 902 aa2.46□□□□□ -2.02
SNX41YDR425W LYS14P40971 790 aa2.46□□□□□ -2.02
SNX41YDR425W COS6P53344 381 aa2.46□□□□□ -2.02
SNX41YDR425W YNL234WP53857 426 aa2.46□□□□□ -2.02
SNX41YDR425W REG1Q00816 1014 aa2.46□□□□□ -2.02
SNX41YDR425W FCP1Q03254 732 aa2.46□□□□□ -2.02
SNX41YDR425W MGR3Q04472 501 aa2.46□□□□□ -2.02
SNX41YDR425W VID22Q05934 901 aa2.46□□□□□ -2.02
SNX41YDR425W ATG17Q06410 417 aa2.46□□□□□ -2.02
SNX41YDR425W VIP1Q06685 1146 aaKnown RBP2.46□□□□□ -2.02
SNX41YDR425W OPY2Q06810 360 aa2.46□□□□□ -2.02
SNX41YDR425W DAS2Q12084 232 aa2.46□□□□□ -2.02
SNX41YDR425W SGT2Q12118 346 aaKnown RBP2.46□□□□□ -2.02
SNX41YDR425W GLE1Q12315 538 aa2.46□□□□□ -2.02
SNX41YDR425W YMR230W-AQ3E7B5 62 aa2.46□□□□□ -2.02
SNX41YDR425W YOR019WQ99248 730 aa2.46□□□□□ -2.02
SNX41YDR425W HIS4P00815 799 aaKnown RBP2.45□□□□□ -2.02
SNX41YDR425W HXK2P04807 486 aaKnown RBP2.45□□□□□ -2.02
SNX41YDR425W GUK1P15454 187 aaKnown RBP2.45□□□□□ -2.02
SNX41YDR425W TOA1P32773 286 aa2.45□□□□□ -2.02
SNX41YDR425W YBL055CP34220 418 aaPredicted RBP2.45□□□□□ -2.02
SNX41YDR425W BMH2P34730 273 aaKnown RBP2.45□□□□□ -2.02
SNX41YDR425W AST1P35183 429 aa2.45□□□□□ -2.02
SNX41YDR425W TEF4P36008 412 aaKnown RBP2.45□□□□□ -2.02
SNX41YDR425W SNU114P36048 1008 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 141.5 ms