RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C YOR012WQ12351 137 aa3.5□□□□□ -1.85
TRS120YDR407C LPX1Q12405 387 aaKnown RBP3.5□□□□□ -1.85
TRS120YDR407C YPR1Q12458 312 aa3.5□□□□□ -1.85
TRS120YDR407C AFI1Q99222 893 aa3.5□□□□□ -1.85
TRS120YDR407C REP1P03871 373 aa3.5□□□□□ -1.85
TRS120YDR407C YCR099CP25657 155 aa3.5□□□□□ -1.85
TRS120YDR407C VRG4P40107 337 aa3.5□□□□□ -1.85
TRS120YDR407C PRM2P40534 656 aa3.5□□□□□ -1.85
TRS120YDR407C IME4P41833 600 aa3.5□□□□□ -1.85
TRS120YDR407C IMD3P50095 523 aaKnown RBP3.5□□□□□ -1.85
TRS120YDR407C YGR053CP53234 283 aa3.5□□□□□ -1.85
TRS120YDR407C PEX13P80667 386 aa3.5□□□□□ -1.85
TRS120YDR407C REG1Q00816 1014 aa3.5□□□□□ -1.85
TRS120YDR407C SKI8Q02793 397 aaPredicted RBP3.5□□□□□ -1.85
TRS120YDR407C DDC1Q08949 612 aa3.5□□□□□ -1.85
TRS120YDR407C RTP1Q12751 981 aa3.5□□□□□ -1.85
TRS120YDR407C FUM1P08417 488 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C ERG20P08524 352 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C MRPL32P25348 183 aa3.49□□□□□ -1.85
TRS120YDR407C YIM1P28625 365 aa3.49□□□□□ -1.85
TRS120YDR407C CBF5P33322 483 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
TRS120YDR407C RCK1P38622 512 aa3.49□□□□□ -1.85
TRS120YDR407C DDI1P40087 428 aa3.49□□□□□ -1.85
TRS120YDR407C QRI7P43122 407 aa3.49□□□□□ -1.85
TRS120YDR407C REX2P54964 269 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C RSF1Q05043 376 aa3.49□□□□□ -1.85
TRS120YDR407C RAD34Q06665 692 aa3.49□□□□□ -1.85
TRS120YDR407C YOR387CQ08910 206 aa3.49□□□□□ -1.85
TRS120YDR407C PGC1Q08959 321 aa3.49□□□□□ -1.85
TRS120YDR407C YOR131CQ12486 218 aa3.49□□□□□ -1.85
TRS120YDR407C CYT1P07143 309 aa3.49□□□□□ -1.85
TRS120YDR407C PUT2P07275 575 aa3.49□□□□□ -1.85
TRS120YDR407C PGS1P25578 521 aa3.49□□□□□ -1.85
TRS120YDR407C CTS1P29029 562 aa3.49□□□□□ -1.85
TRS120YDR407C SPC105P53148 917 aa3.49□□□□□ -1.85
TRS120YDR407C RRN5Q02983 363 aa3.49□□□□□ -1.85
TRS120YDR407C HER2Q03557 464 aa3.49□□□□□ -1.85
TRS120YDR407C MUS81Q04149 632 aaPredicted RBP3.49□□□□□ -1.85
TRS120YDR407C SEC13Q04491 297 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C CLP1Q08685 445 aaPredicted RBP3.49□□□□□ -1.85
TRS120YDR407C RTT10Q08924 1013 aa3.49□□□□□ -1.85
TRS120YDR407C RUP1Q12242 671 aa3.49□□□□□ -1.85
TRS120YDR407C CYC1P00044 109 aaPredicted RBP3.49□□□□□ -1.85
TRS120YDR407C HEM2P05373 342 aa3.49□□□□□ -1.85
TRS120YDR407C ENA1P13587 1091 aa3.49□□□□□ -1.85
TRS120YDR407C PRP21P32524 280 aaPredicted RBP3.49□□□□□ -1.85
TRS120YDR407C LOT5P34234 306 aa3.49□□□□□ -1.85
TRS120YDR407C ARP1P38696 384 aa3.49□□□□□ -1.85
TRS120YDR407C HEM14P40012 539 aa3.49□□□□□ -1.85
TRS120YDR407C AAD10P47182 288 aa3.49□□□□□ -1.85
TRS120YDR407C ARE2P53629 642 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C PRM1P53835 661 aa3.49□□□□□ -1.85
TRS120YDR407C ENA2Q01896 1091 aa3.49□□□□□ -1.85
TRS120YDR407C RSC9Q03124 581 aa3.49□□□□□ -1.85
TRS120YDR407C EFR3Q03653 782 aaKnown RBP3.49□□□□□ -1.85
TRS120YDR407C CEF1Q03654 590 aaPredicted RBP3.49□□□□□ -1.85
TRS120YDR407C CSN9Q03981 162 aa3.49□□□□□ -1.85
TRS120YDR407C ENA5Q12691 1091 aa3.49□□□□□ -1.85
TRS120YDR407C YDR461C-AQ2V2P7 80 aa3.49□□□□□ -1.85
TRS120YDR407C TRA1P38811 3744 aa3.48□□□□□ -1.85
TRS120YDR407C MOD5P07884 428 aa3.48□□□□□ -1.85
TRS120YDR407C GUK1P15454 187 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C SAC1P32368 623 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C SHE3P38272 425 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C YBR138CP38277 524 aa3.48□□□□□ -1.85
TRS120YDR407C IFA38P38286 347 aa3.48□□□□□ -1.85
TRS120YDR407C PTH1P38876 190 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C VAC8P39968 578 aa3.48□□□□□ -1.85
TRS120YDR407C SNM1P40993 198 aa3.48□□□□□ -1.85
TRS120YDR407C MET12P46151 657 aa3.48□□□□□ -1.85
TRS120YDR407C AIM22P47051 409 aa3.48□□□□□ -1.85
TRS120YDR407C AMA1P50082 593 aa3.48□□□□□ -1.85
TRS120YDR407C YGL235WP53071 178 aa3.48□□□□□ -1.85
TRS120YDR407C YNR063WP53749 607 aa3.48□□□□□ -1.85
TRS120YDR407C RTN1Q04947 295 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C LDB18Q07887 179 aa3.48□□□□□ -1.85
TRS120YDR407C ADF1Q2V2Q1 113 aa3.48□□□□□ -1.85
TRS120YDR407C YCL012CQ8J0M4 134 aa3.48□□□□□ -1.85
TRS120YDR407C TRP3P00937 484 aa3.48□□□□□ -1.85
TRS120YDR407C LEU1P07264 779 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C APE1P14904 514 aa3.48□□□□□ -1.85
TRS120YDR407C RFA2P26754 273 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C PRP19P32523 503 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C TFB1P32776 642 aa3.48□□□□□ -1.85
TRS120YDR407C MAP2P38174 421 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C SWD1P39706 426 aa3.48□□□□□ -1.85
TRS120YDR407C YER034WP40022 185 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C MPC1P53157 130 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C YMR310CQ04867 317 aaPredicted RBP3.48□□□□□ -1.85
TRS120YDR407C VPS74Q06385 345 aa3.48□□□□□ -1.85
TRS120YDR407C ARR1Q06596 294 aa3.48□□□□□ -1.85
TRS120YDR407C SMF3Q12078 473 aaPredicted RBP3.48□□□□□ -1.85
TRS120YDR407C SRF1Q12516 437 aa3.48□□□□□ -1.85
TRS120YDR407C HTZ1Q12692 134 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C RRP7P25368 297 aaPredicted RBP3.48□□□□□ -1.85
TRS120YDR407C SPO23P33757 523 aa3.48□□□□□ -1.85
TRS120YDR407C TSA1P34760 196 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C YPT52P36018 234 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C YKR023WP36119 530 aaKnown RBP3.48□□□□□ -1.85
TRS120YDR407C YBR137WP38276 179 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms