RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C HIP1P06775 603 aa3.97□□□□□ -1.77
SHU2YDR078C MCM4P30665 933 aaKnown RBP3.97□□□□□ -1.77
SHU2YDR078C LTV1P34078 463 aa3.97□□□□□ -1.77
SHU2YDR078C YPK3P38070 525 aa3.97□□□□□ -1.77
SHU2YDR078C SCO2P38072 301 aa3.97□□□□□ -1.77
SHU2YDR078C RTS2P40962 232 aa3.97□□□□□ -1.77
SHU2YDR078C RMD9P53140 646 aaKnown RBP3.97□□□□□ -1.77
SHU2YDR078C CUL3P53202 744 aa3.97□□□□□ -1.77
SHU2YDR078C YGR111WP53265 400 aa3.97□□□□□ -1.77
SHU2YDR078C PEX25Q02969 394 aa3.97□□□□□ -1.77
SHU2YDR078C ACL4Q03771 387 aa3.97□□□□□ -1.77
SHU2YDR078C DIC1Q06143 298 aa3.97□□□□□ -1.77
SHU2YDR078C MMR1Q06324 491 aa3.97□□□□□ -1.77
SHU2YDR078C VAM3Q12241 283 aa3.97□□□□□ -1.77
SHU2YDR078C RRD2Q12461 358 aa3.97□□□□□ -1.77
SHU2YDR078C YPR089WO13585 888 aa3.96□□□□□ -1.78
SHU2YDR078C RIP1P08067 215 aa3.96□□□□□ -1.78
SHU2YDR078C BAR1P12630 587 aa3.96□□□□□ -1.78
SHU2YDR078C ATP10P18496 279 aa3.96□□□□□ -1.78
SHU2YDR078C URA4P20051 364 aa3.96□□□□□ -1.78
SHU2YDR078C AIM17P23180 465 aaKnown RBP3.96□□□□□ -1.78
SHU2YDR078C RRP7P25368 297 aaPredicted RBP3.96□□□□□ -1.78
SHU2YDR078C ATP11P32453 318 aa3.96□□□□□ -1.78
SHU2YDR078C DPH2P32461 534 aa3.96□□□□□ -1.78
SHU2YDR078C PHD1P36093 366 aa3.96□□□□□ -1.78
SHU2YDR078C YHR054CP38780 354 aa3.96□□□□□ -1.78
SHU2YDR078C YMR124WP39523 943 aaKnown RBP3.96□□□□□ -1.78
SHU2YDR078C XBP1P40489 647 aa3.96□□□□□ -1.78
SHU2YDR078C TFG2P41896 400 aaPredicted RBP3.96□□□□□ -1.78
SHU2YDR078C YGR016WP53209 190 aa3.96□□□□□ -1.78
SHU2YDR078C VPS54Q12071 889 aa3.96□□□□□ -1.78
SHU2YDR078C RPN5Q12250 445 aaKnown RBP3.96□□□□□ -1.78
SHU2YDR078C HER1Q12276 1246 aa3.96□□□□□ -1.78
SHU2YDR078C ARP6Q12509 438 aa3.96□□□□□ -1.78
SHU2YDR078C SPT7P35177 1332 aa3.95□□□□□ -1.78
SHU2YDR078C YPT1P01123 206 aaKnown RBP3.95□□□□□ -1.78
SHU2YDR078C SRV2P17555 526 aaKnown RBP3.95□□□□□ -1.78
SHU2YDR078C CLN1P20437 546 aa3.95□□□□□ -1.78
SHU2YDR078C BRF1P29056 596 aa3.95□□□□□ -1.78
SHU2YDR078C MGM1P32266 881 aa3.95□□□□□ -1.78
SHU2YDR078C HIR2P32480 875 aa3.95□□□□□ -1.78
SHU2YDR078C GYP6P32806 458 aa3.95□□□□□ -1.78
SHU2YDR078C PDR3P33200 976 aa3.95□□□□□ -1.78
SHU2YDR078C SPC34P36131 295 aa3.95□□□□□ -1.78
SHU2YDR078C VHC1P38329 1120 aa3.95□□□□□ -1.78
SHU2YDR078C ERG7P38604 731 aa3.95□□□□□ -1.78
SHU2YDR078C PCL6P40038 420 aa3.95□□□□□ -1.78
SHU2YDR078C EFM4P40516 257 aa3.95□□□□□ -1.78
SHU2YDR078C FET5P43561 622 aa3.95□□□□□ -1.78
SHU2YDR078C RPT4P53549 437 aaKnown RBP3.95□□□□□ -1.78
SHU2YDR078C ESBP6P53918 673 aa3.95□□□□□ -1.78
SHU2YDR078C KTR5P53966 522 aaPredicted RBP3.95□□□□□ -1.78
SHU2YDR078C YMR130WQ04223 302 aa3.95□□□□□ -1.78
SHU2YDR078C HEL2Q05580 639 aaKnown RBP3.95□□□□□ -1.78
SHU2YDR078C DCI1Q08558 271 aa3.95□□□□□ -1.78
SHU2YDR078C UAF30Q08747 228 aa3.95□□□□□ -1.78
SHU2YDR078C MED2Q12124 431 aa3.95□□□□□ -1.78
SHU2YDR078C MES1P00958 751 aaKnown RBP3.94□□□□□ -1.78
SHU2YDR078C RPL42AP0CX27 106 aaKnown RBP3.94□□□□□ -1.78
SHU2YDR078C RPL42BP0CX28 106 aaKnown RBP3.94□□□□□ -1.78
SHU2YDR078C SPO7P18410 259 aa3.94□□□□□ -1.78
SHU2YDR078C YCR007CP25354 239 aa3.94□□□□□ -1.78
SHU2YDR078C KRE2P27809 442 aa3.94□□□□□ -1.78
SHU2YDR078C CAJ1P39101 391 aa3.94□□□□□ -1.78
SHU2YDR078C SER3P40054 469 aa3.94□□□□□ -1.78
SHU2YDR078C SYG1P40528 902 aa3.94□□□□□ -1.78
SHU2YDR078C POP1P41812 875 aa3.94□□□□□ -1.78
SHU2YDR078C BNA3P47039 444 aaKnown RBP3.94□□□□□ -1.78
SHU2YDR078C ECM27P47144 725 aa3.94□□□□□ -1.78
SHU2YDR078C TOM22P49334 152 aa3.94□□□□□ -1.78
SHU2YDR078C SMA1Q02651 245 aa3.94□□□□□ -1.78
SHU2YDR078C MSS11Q03825 758 aa3.94□□□□□ -1.78
SHU2YDR078C RSF1Q05043 376 aa3.94□□□□□ -1.78
SHU2YDR078C BSC1Q12140 328 aa3.94□□□□□ -1.78
SHU2YDR078C HSP42Q12329 375 aa3.94□□□□□ -1.78
SHU2YDR078C YCP4P25349 247 aaKnown RBP3.93□□□□□ -1.78
SHU2YDR078C GEX1P25596 615 aa3.93□□□□□ -1.78
SHU2YDR078C UTR4P32626 227 aa3.93□□□□□ -1.78
SHU2YDR078C TMT1P32643 299 aa3.93□□□□□ -1.78
SHU2YDR078C REC114P32841 428 aa3.93□□□□□ -1.78
SHU2YDR078C HEL1P36113 551 aa3.93□□□□□ -1.78
SHU2YDR078C MMS4P38257 691 aa3.93□□□□□ -1.78
SHU2YDR078C SLD5Q03406 294 aa3.93□□□□□ -1.78
SHU2YDR078C IVY1Q04934 453 aa3.93□□□□□ -1.78
SHU2YDR078C GLO2Q05584 274 aa3.93□□□□□ -1.78
SHU2YDR078C DCS1Q06151 350 aa3.93□□□□□ -1.78
SHU2YDR078C PHO92Q06390 306 aa3.93□□□□□ -1.78
SHU2YDR078C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SHU2YDR078C THI20Q08224 551 aa3.93□□□□□ -1.78
SHU2YDR078C KEL3Q08979 651 aaPredicted RBP3.93□□□□□ -1.78
SHU2YDR078C CFT2Q12102 859 aaPredicted RBP3.93□□□□□ -1.78
SHU2YDR078C LPD1P09624 499 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C SEC63P14906 663 aa3.92□□□□□ -1.78
SHU2YDR078C TPM1P17536 199 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C GLK1P17709 500 aaKnown RBP3.92□□□□□ -1.78
SHU2YDR078C MGR1P25573 417 aa3.92□□□□□ -1.78
SHU2YDR078C FUN19P28003 413 aaPredicted RBP3.92□□□□□ -1.78
SHU2YDR078C BEM1P29366 551 aa3.92□□□□□ -1.78
SHU2YDR078C SIN4P32259 974 aa3.92□□□□□ -1.78
SHU2YDR078C ANP1P32629 500 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms