RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	AIM33	Q04516	312 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	ARP9	Q05123	467 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	SPH1	Q06160	661 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	LUC7	Q07508	261 aa	Predicted RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	YOL159C	Q08300	171 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	TY3A-G	Q12173	290 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	SMC6	Q12749	1114 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	YJR112W-A	Q3E743	109 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	TY3A-I	Q99219	290 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	ILV1	P00927	576 aa	Known RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	RPL22A	P05749	121 aa	Known RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	CBS1	P14066	229 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	PGS1	P25578	521 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	MCM4	P30665	933 aa	Known RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	MCR1	P36060	302 aa	Known RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	SCO2	P38072	301 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	DBP8	P38719	431 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	GAA1	P39012	614 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	NDE1	P40215	560 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	IRC6	P43615	237 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	RSC1	P53236	928 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	DPB4	Q04603	196 aa	Known RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	UTP21	Q06078	939 aa	Predicted RBP	4.61	□□□□□ -1.67
PTC1	YDL006W	ATG26	Q06321	1198 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	ARP6	Q12509	438 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	YPT6	Q99260	215 aa		4.61	□□□□□ -1.67
PTC1	YDL006W	YPT1	P01123	206 aa	Known RBP	4.6	□□□□□ -1.67
PTC1	YDL006W	ARG81	P05085	880 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	PUT2	P07275	575 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PTC1	YDL006W	CKA2	P19454	339 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	BUD5	P25300	642 aa	Predicted RBP	4.6	□□□□□ -1.67
PTC1	YDL006W	YCP4	P25349	247 aa	Known RBP	4.6	□□□□□ -1.67
PTC1	YDL006W	ASK1	P35734	292 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	JNM1	P36224	373 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	LEU5	P38702	357 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	FLO5	P38894	1075 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	NOC2	P39744	710 aa	Known RBP	4.6	□□□□□ -1.67
PTC1	YDL006W	ARF3	P40994	183 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
PTC1	YDL006W	VTC2	P43585	828 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	TIM10	P87108	93 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	EMI2	Q04409	500 aa	Known RBP	4.6	□□□□□ -1.67
PTC1	YDL006W	MFB1	Q04922	465 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	GSH2	Q08220	491 aa		4.6	□□□□□ -1.67
PTC1	YDL006W	INH1	P01097	85 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	MYO1	P08964	1928 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	RPB8	P20436	146 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	BOS1	P25385	244 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	YBL055C	P34220	418 aa	Predicted RBP	4.59	□□□□□ -1.67
PTC1	YDL006W	SHP1	P34223	423 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	YKL100C	P34248	587 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	RKM3	P38222	552 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	REG2	P38232	338 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	ARP1	P38696	384 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	PHO90	P39535	881 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	AFG3	P39925	761 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	PCL6	P40038	420 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	RMD8	P43620	662 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	SGF73	P53165	657 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	ZPR1	P53303	486 aa	Known RBP	4.59	□□□□□ -1.67
PTC1	YDL006W	YNL181W	P53878	407 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	PGA2	P53903	129 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	SLD5	Q03406	294 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	TDA9	Q04545	1251 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	HCR1	Q05775	265 aa	Known RBP	4.59	□□□□□ -1.67
PTC1	YDL006W	ADE13	Q05911	482 aa	Known RBP	4.59	□□□□□ -1.67
PTC1	YDL006W	TEN1	Q07921	160 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	TLG2	Q08144	397 aa		4.59	□□□□□ -1.67
PTC1	YDL006W	FOB1	O13329	566 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	CLN3	P13365	580 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	IMG1	P25626	169 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	SYN8	P31377	255 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	YBR144C	P34215	104 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	MIC60	P36112	540 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	UBA4	P38820	440 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	HXT9	P40885	567 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	PTR3	P43606	678 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	MDV1	P47025	714 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	LCL3	P53153	274 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	BOP3	P53958	396 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	FIN1	Q03898	291 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	GRC3	Q07845	632 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	BUD7	Q08754	746 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	UBX3	Q12229	455 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	HER1	Q12276	1246 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	ERP3	Q12403	225 aa		4.58	□□□□□ -1.68
PTC1	YDL006W	RGT1	P32862	1170 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	SEF1	P34228	1148 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	MRPL10	P36520	322 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	ICS2	P38284	255 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	SIP3	P38717	1229 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	HMF1	P40037	129 aa	Known RBP	4.57	□□□□□ -1.68
PTC1	YDL006W	VRG4	P40107	337 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	IAH1	P41734	238 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	TFG2	P41896	400 aa	Predicted RBP	4.57	□□□□□ -1.68
PTC1	YDL006W	GPD2	P41911	440 aa	Known RBP	4.57	□□□□□ -1.68
PTC1	YDL006W	PYK2	P52489	506 aa	Known RBP	4.57	□□□□□ -1.68
PTC1	YDL006W	FUS2	Q05670	677 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	AFT2	Q08957	416 aa		4.57	□□□□□ -1.68
PTC1	YDL006W	AVL9	Q12500	764 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms