RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB3, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB3	YBR278W	RPN5	Q12250	445 aa	Known RBP	3.2	□□□□□ -1.9
DPB3	YBR278W	RRD2	Q12461	358 aa		3.2	□□□□□ -1.9
DPB3	YBR278W	YNL162W-A	Q3E7A8	72 aa		3.2	□□□□□ -1.9
DPB3	YBR278W	BRR1	Q99177	341 aa	Predicted RBP	3.2	□□□□□ -1.9
DPB3	YBR278W	YLR278C	Q05854	1341 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	SUC2	P00724	532 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	RIP1	P08067	215 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	YER190C-B	P0CX94	160 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	YEL077W-A	P0CX95	160 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	YGR296C-B	P0CX96	160 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	YPL283W-B	P0CX97	160 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	YPR204C-A	P0CX98	160 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	KRE2	P27809	442 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	MGM1	P32266	881 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	ANP1	P32629	500 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	CUE2	P36075	443 aa	Known RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	PHD1	P36093	366 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	DUG2	P38149	878 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	FLO5	P38894	1075 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	CAJ1	P39101	391 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	SER3	P40054	469 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	RTS2	P40962	232 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	TFG2	P41896	400 aa	Predicted RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	PSA1	P41940	361 aa	Known RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	ECM27	P47144	725 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	RMD9	P53140	646 aa	Known RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	ZPR1	P53303	486 aa	Known RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	YMR130W	Q04223	302 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	ECI1	Q05871	280 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	COQ11	Q05892	277 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	VPS54	Q12071	889 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	CFT2	Q12102	859 aa	Predicted RBP	3.19	□□□□□ -1.9
DPB3	YBR278W	MED2	Q12124	431 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	NDJ1	Q12366	352 aa		3.19	□□□□□ -1.9
DPB3	YBR278W	MES1	P00958	751 aa	Known RBP	3.18	□□□□□ -1.9
DPB3	YBR278W	LPD1	P09624	499 aa	Known RBP	3.18	□□□□□ -1.9
DPB3	YBR278W	SRV2	P17555	526 aa	Known RBP	3.18	□□□□□ -1.9
DPB3	YBR278W	ATP10	P18496	279 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	BRF1	P29056	596 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	BEM1	P29366	551 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	HIR2	P32480	875 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	PDR3	P33200	976 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	HEL1	P36113	551 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	SCO2	P38072	301 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	MMS4	P38257	691 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	YMR124W	P39523	943 aa	Known RBP	3.18	□□□□□ -1.9
DPB3	YBR278W	SYG1	P40528	902 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	FET5	P43561	622 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	TOM22	P49334	152 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	RPL15B	P54780	204 aa	Predicted RBP	3.18	□□□□□ -1.9
DPB3	YBR278W	DCS1	Q06151	350 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	GSH2	Q08220	491 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	DCI1	Q08558	271 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	UAF30	Q08747	228 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	HER1	Q12276	1246 aa		3.18	□□□□□ -1.9
DPB3	YBR278W	RPL42A	P0CX27	106 aa	Known RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	RPL42B	P0CX28	106 aa	Known RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	SPO7	P18410	259 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	AIM17	P23180	465 aa	Known RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	YCR007C	P25354	239 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	PPZ1	P26570	692 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	SIN4	P32259	974 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	RPN2	P32565	945 aa	Known RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	REC114	P32841	428 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	SWH1	P35845	1188 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	SPC34	P36131	295 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	YPK3	P38070	525 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	VHC1	P38329	1120 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	ERG7	P38604	731 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	PCL6	P40038	420 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	POP1	P41812	875 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	ESBP6	P53918	673 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	OCA2	P53949	197 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	BET4	Q00618	327 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	MSS11	Q03825	758 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	IVY1	Q04934	453 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	THI7	Q05998	598 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
DPB3	YBR278W	DIS3	Q08162	1001 aa	Known RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	KEL3	Q08979	651 aa	Predicted RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	ATX2	Q12067	313 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	SMF3	Q12078	473 aa	Predicted RBP	3.17	□□□□□ -1.9
DPB3	YBR278W	BSC1	Q12140	328 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	ARP6	Q12509	438 aa		3.17	□□□□□ -1.9
DPB3	YBR278W	TY1B-A	O13527	1196 aa	Known RBP	3.16	□□□□□ -1.9
DPB3	YBR278W	MDM10	P18409	493 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	YCP4	P25349	247 aa	Known RBP	3.16	□□□□□ -1.9
DPB3	YBR278W	GEX1	P25596	615 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	MSP1	P28737	362 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	GYP6	P32806	458 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	CBP4	P37267	147 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	EFM2	P38347	419 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	CCT2	P39076	527 aa	Known RBP	3.16	□□□□□ -1.9
DPB3	YBR278W	XBP1	P40489	647 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
DPB3	YBR278W	YJL132W	P47014	750 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	BTN2	P53286	410 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	GPI1	P53306	609 aa		3.16	□□□□□ -1.9
DPB3	YBR278W	RPT4	P53549	437 aa	Known RBP	3.16	□□□□□ -1.9
DPB3	YBR278W	SMA1	Q02651	245 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms