RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C NOC2P39744 710 aaKnown RBP3.19□□□□□ -1.9
SHG1YBR258C FET5P43561 622 aa3.19□□□□□ -1.9
SHG1YBR258C IRC6P43615 237 aa3.19□□□□□ -1.9
SHG1YBR258C YGR066CP53242 292 aa3.19□□□□□ -1.9
SHG1YBR258C SEC5P89102 971 aa3.19□□□□□ -1.9
SHG1YBR258C NUP100Q02629 959 aa3.19□□□□□ -1.9
SHG1YBR258C FIN1Q03898 291 aa3.19□□□□□ -1.9
SHG1YBR258C UBX2Q04228 584 aa3.19□□□□□ -1.9
SHG1YBR258C YMR254CQ04838 102 aa3.19□□□□□ -1.9
SHG1YBR258C YDL218WQ07629 317 aa3.19□□□□□ -1.9
SHG1YBR258C BUD7Q08754 746 aa3.19□□□□□ -1.9
SHG1YBR258C CBS1P14066 229 aa3.18□□□□□ -1.9
SHG1YBR258C OCA4P25366 362 aa3.18□□□□□ -1.9
SHG1YBR258C PRD1P25375 712 aa3.18□□□□□ -1.9
SHG1YBR258C IMG1P25626 169 aa3.18□□□□□ -1.9
SHG1YBR258C YUR1P26725 428 aa3.18□□□□□ -1.9
SHG1YBR258C SNC1P31109 117 aa3.18□□□□□ -1.9
SHG1YBR258C MUM2P38236 366 aa3.18□□□□□ -1.9
SHG1YBR258C MET28P40573 187 aa3.18□□□□□ -1.9
SHG1YBR258C SNM1P40993 198 aa3.18□□□□□ -1.9
SHG1YBR258C HOS2P53096 452 aaPredicted RBP3.18□□□□□ -1.9
SHG1YBR258C TIM10P87108 93 aa3.18□□□□□ -1.9
SHG1YBR258C RSM23Q01163 450 aa3.18□□□□□ -1.9
SHG1YBR258C NUP53Q03790 475 aa3.18□□□□□ -1.9
SHG1YBR258C NCE102Q12207 173 aaRIP-Chip data3.18□□□□□ -1.9not detected
SHG1YBR258C SSK22P25390 1331 aaPredicted RBP3.18□□□□□ -1.9
SHG1YBR258C TRA1P38811 3744 aa3.17□□□□□ -1.9
SHG1YBR258C SNF3P10870 884 aa3.17□□□□□ -1.9
SHG1YBR258C PMS1P14242 873 aa3.17□□□□□ -1.9
SHG1YBR258C YCR043CP25361 127 aa3.17□□□□□ -1.9
SHG1YBR258C RKM3P38222 552 aa3.17□□□□□ -1.9
SHG1YBR258C LAG1P38703 411 aa3.17□□□□□ -1.9
SHG1YBR258C CIN4P39110 191 aa3.17□□□□□ -1.9
SHG1YBR258C VAB2P40003 282 aa3.17□□□□□ -1.9
SHG1YBR258C VRG4P40107 337 aa3.17□□□□□ -1.9
SHG1YBR258C TES1P41903 349 aaKnown RBP3.17□□□□□ -1.9
SHG1YBR258C RMD8P43620 662 aa3.17□□□□□ -1.9
SHG1YBR258C GUF1P46943 645 aa3.17□□□□□ -1.9
SHG1YBR258C LCL3P53153 274 aa3.17□□□□□ -1.9
SHG1YBR258C YMR034CQ05131 434 aaPredicted RBP3.17□□□□□ -1.9
SHG1YBR258C TSR2Q06672 205 aaKnown RBP3.17□□□□□ -1.9
SHG1YBR258C YAP7Q08182 245 aa3.17□□□□□ -1.9
SHG1YBR258C ARP6Q12509 438 aa3.17□□□□□ -1.9
SHG1YBR258C AUS1Q08409 1394 aa3.16□□□□□ -1.9
SHG1YBR258C CDC31P06704 161 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C ART10P18634 518 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C ELO2P25358 347 aa3.16□□□□□ -1.9
SHG1YBR258C MGR1P25573 417 aa3.16□□□□□ -1.9
SHG1YBR258C WBP1P33767 430 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C SEF1P34228 1148 aa3.16□□□□□ -1.9
SHG1YBR258C YKL097CP34245 136 aa3.16□□□□□ -1.9
SHG1YBR258C PHD1P36093 366 aa3.16□□□□□ -1.9
SHG1YBR258C TCD2P36101 447 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C RPL32P38061 130 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C YHR210CP38893 341 aa3.16□□□□□ -1.9
SHG1YBR258C ERP2P39704 215 aa3.16□□□□□ -1.9
SHG1YBR258C YEL057CP39983 233 aa3.16□□□□□ -1.9
SHG1YBR258C PTR3P43606 678 aa3.16□□□□□ -1.9
SHG1YBR258C ROK1P45818 564 aaPredicted RBP3.16□□□□□ -1.9
SHG1YBR258C RBG2P53295 368 aaKnown RBP3.16□□□□□ -1.9
SHG1YBR258C YNL234WP53857 426 aa3.16□□□□□ -1.9
SHG1YBR258C RHO4Q00246 291 aa3.16□□□□□ -1.9
SHG1YBR258C YMR160WQ03823 816 aa3.16□□□□□ -1.9
SHG1YBR258C RPC11Q04307 110 aaPredicted RBP3.16□□□□□ -1.9
SHG1YBR258C TDA9Q04545 1251 aa3.16□□□□□ -1.9
SHG1YBR258C SNA4Q07549 140 aa3.16□□□□□ -1.9
SHG1YBR258C YOR365CQ08844 703 aa3.16□□□□□ -1.9
SHG1YBR258C AVL9Q12500 764 aa3.16□□□□□ -1.9
SHG1YBR258C MRP13P12686 339 aa3.15□□□□□ -1.91
SHG1YBR258C CDC23P16522 626 aa3.15□□□□□ -1.91
SHG1YBR258C TYR1P20049 452 aa3.15□□□□□ -1.91
SHG1YBR258C SUI2P20459 304 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C RPS2P25443 254 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C RPN2P32565 945 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C MRE11P32829 692 aa3.15□□□□□ -1.91
SHG1YBR258C RGT1P32862 1170 aa3.15□□□□□ -1.91
SHG1YBR258C SRO77P38163 1010 aa3.15□□□□□ -1.91
SHG1YBR258C REG2P38232 338 aa3.15□□□□□ -1.91
SHG1YBR258C ICS2P38284 255 aa3.15□□□□□ -1.91
SHG1YBR258C YER130CP39959 443 aa3.15□□□□□ -1.91
SHG1YBR258C YND1P40009 630 aa3.15□□□□□ -1.91
SHG1YBR258C NDE1P40215 560 aa3.15□□□□□ -1.91
SHG1YBR258C ALG5P40350 334 aa3.15□□□□□ -1.91
SHG1YBR258C SPO22P40511 975 aa3.15□□□□□ -1.91
SHG1YBR258C SGN1P40561 250 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SHG1YBR258C YIR014WP40570 242 aa3.15□□□□□ -1.91
SHG1YBR258C YJR154WP47181 346 aa3.15□□□□□ -1.91
SHG1YBR258C SRB7P47822 140 aa3.15□□□□□ -1.91
SHG1YBR258C IMD4P50094 524 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C DRN1P53255 507 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C LSC1P53598 329 aaKnown RBP3.15□□□□□ -1.91
SHG1YBR258C JJJ1P53863 590 aa3.15□□□□□ -1.91
SHG1YBR258C MDM1Q01846 1127 aa3.15□□□□□ -1.91
SHG1YBR258C IRC4Q03036 179 aa3.15□□□□□ -1.91
SHG1YBR258C VPS38Q05919 439 aa3.15□□□□□ -1.91
SHG1YBR258C YLR352WQ06479 807 aa3.15□□□□□ -1.91
SHG1YBR258C RDR1Q08904 546 aa3.15□□□□□ -1.91
SHG1YBR258C BSC1Q12140 328 aa3.15□□□□□ -1.91
SHG1YBR258C RLM1Q12224 676 aa3.15□□□□□ -1.91
SHG1YBR258C PEP4P07267 405 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms