RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C MET17P06106 444 aa2.29□□□□□ -2.04
CLN3YAL040C ERG20P08524 352 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C SSC1P0CS90 654 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C RPS17BP14127 136 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C PWP1P21304 576 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C KIN3P22209 435 aa2.29□□□□□ -2.04
CLN3YAL040C PEX1P24004 1043 aa2.29□□□□□ -2.04
CLN3YAL040C SEC14P24280 304 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C YCR051WP25631 222 aa2.29□□□□□ -2.04
CLN3YAL040C URA7P28274 579 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C YME1P32795 747 aa2.29□□□□□ -2.04
CLN3YAL040C TKL2P33315 681 aa2.29□□□□□ -2.04
CLN3YAL040C PPZ2P33329 710 aa2.29□□□□□ -2.04
CLN3YAL040C YBR032WP38223 100 aa2.29□□□□□ -2.04
CLN3YAL040C URA8P38627 578 aaPredicted RBP2.29□□□□□ -2.04
CLN3YAL040C FSH1P38777 243 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C AIM18P38884 321 aa2.29□□□□□ -2.04
CLN3YAL040C SCC4P40090 624 aa2.29□□□□□ -2.04
CLN3YAL040C PFK26P40433 827 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C UBP7P40453 1071 aa2.29□□□□□ -2.04
CLN3YAL040C SEC28P40509 296 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C OPT1P40897 799 aa2.29□□□□□ -2.04
CLN3YAL040C BST1P43571 1029 aa2.29□□□□□ -2.04
CLN3YAL040C GUF1P46943 645 aa2.29□□□□□ -2.04
CLN3YAL040C DUO1P53168 247 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C BIO4P53630 237 aa2.29□□□□□ -2.04
CLN3YAL040C YNR071CP53757 342 aa2.29□□□□□ -2.04
CLN3YAL040C SHR3Q02774 210 aa2.29□□□□□ -2.04
CLN3YAL040C PEX25Q02969 394 aa2.29□□□□□ -2.04
CLN3YAL040C ADE13Q05911 482 aaKnown RBP2.29□□□□□ -2.04
CLN3YAL040C ECM30Q06673 1274 aa2.29□□□□□ -2.04
CLN3YAL040C DIN7Q12086 430 aa2.29□□□□□ -2.04
CLN3YAL040C REX3Q12090 404 aa2.29□□□□□ -2.04
CLN3YAL040C YLL056CQ12177 298 aa2.29□□□□□ -2.04
CLN3YAL040C HAL9Q12180 1030 aa2.29□□□□□ -2.04
CLN3YAL040C LCB4Q12246 624 aa2.29□□□□□ -2.04
CLN3YAL040C ISA2Q12425 185 aa2.29□□□□□ -2.04
CLN3YAL040C AVL9Q12500 764 aa2.29□□□□□ -2.04
CLN3YAL040C SKS1Q12505 502 aa2.29□□□□□ -2.04
CLN3YAL040C Q0142Q9ZZW4 58 aa2.29□□□□□ -2.04
CLN3YAL040C AI5_ALPHAQ9ZZX1 630 aa2.29□□□□□ -2.04
CLN3YAL040C YLR415CO13578 112 aa2.28□□□□□ -2.04
CLN3YAL040C HAP2P06774 265 aa2.28□□□□□ -2.04
CLN3YAL040C SEC53P07283 254 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C TUB1P09733 447 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C IMA3P0CW40 589 aa2.28□□□□□ -2.04
CLN3YAL040C IMA4P0CW41 589 aa2.28□□□□□ -2.04
CLN3YAL040C YPK1P12688 680 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C GLK1P17709 500 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C CLB1P24868 471 aa2.28□□□□□ -2.04
CLN3YAL040C STE50P25344 346 aa2.28□□□□□ -2.04
CLN3YAL040C YIH1P25637 258 aa2.28□□□□□ -2.04
CLN3YAL040C DEP1P31385 405 aa2.28□□□□□ -2.04
CLN3YAL040C DGR2P32330 852 aa2.28□□□□□ -2.04
CLN3YAL040C GDA1P32621 518 aa2.28□□□□□ -2.04
CLN3YAL040C RPC37P36121 282 aa2.28□□□□□ -2.04
CLN3YAL040C ETR1P38071 380 aa2.28□□□□□ -2.04
CLN3YAL040C SHE3P38272 425 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C FTH1P38310 465 aa2.28□□□□□ -2.04
CLN3YAL040C DIA4P38705 446 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C MSR1P38714 643 aa2.28□□□□□ -2.04
CLN3YAL040C FHL1P39521 936 aa2.28□□□□□ -2.04
CLN3YAL040C MRX1P40050 688 aa2.28□□□□□ -2.04
CLN3YAL040C LTP1P40347 161 aa2.28□□□□□ -2.04
CLN3YAL040C YJR061WP40355 935 aa2.28□□□□□ -2.04
CLN3YAL040C DSN1P40568 576 aa2.28□□□□□ -2.04
CLN3YAL040C YJL107CP42947 387 aa2.28□□□□□ -2.04
CLN3YAL040C RPS10BP46784 105 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C SNG1P46950 547 aa2.28□□□□□ -2.04
CLN3YAL040C TRF5P48561 642 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C RFX1P48743 811 aa2.28□□□□□ -2.04
CLN3YAL040C VPS73P53142 486 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C IMO32P53219 342 aa2.28□□□□□ -2.04
CLN3YAL040C PEF1P53238 335 aa2.28□□□□□ -2.04
CLN3YAL040C TRM112P53738 135 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C YNL247WP53852 767 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C RPL22BP56628 122 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C YSA1Q01976 231 aa2.28□□□□□ -2.04
CLN3YAL040C ADA2Q02336 434 aa2.28□□□□□ -2.04
CLN3YAL040C EMI2Q04409 500 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C RCO1Q04779 684 aa2.28□□□□□ -2.04
CLN3YAL040C ARP9Q05123 467 aa2.28□□□□□ -2.04
CLN3YAL040C ECM22Q05958 814 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C YET3Q07451 203 aa2.28□□□□□ -2.04
CLN3YAL040C AAD4Q07747 329 aa2.28□□□□□ -2.04
CLN3YAL040C IMA2Q08295 589 aa2.28□□□□□ -2.04
CLN3YAL040C SLD7Q08457 257 aa2.28□□□□□ -2.04
CLN3YAL040C SGO1Q08490 590 aa2.28□□□□□ -2.04
CLN3YAL040C RPS10AQ08745 105 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C CIR2Q08822 631 aa2.28□□□□□ -2.04
CLN3YAL040C LEA1Q08963 238 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C YLR053CQ12026 108 aa2.28□□□□□ -2.04
CLN3YAL040C NMD4Q12129 218 aa2.28□□□□□ -2.04
CLN3YAL040C NCA2Q12374 616 aa2.28□□□□□ -2.04
CLN3YAL040C PDH1Q12428 516 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C SKM1Q12469 655 aa2.28□□□□□ -2.04
CLN3YAL040C RRP36Q12481 300 aaPredicted RBP2.28□□□□□ -2.04
CLN3YAL040C PAR32Q12515 295 aaKnown RBP2.28□□□□□ -2.04
CLN3YAL040C COX5AP00424 153 aa2.28□□□□□ -2.05
CLN3YAL040C STF1P01098 86 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms