RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 FRT1Q99332 602 aa8.47□□□□□ -1.05
LSR1LSR1 MF(ALPHA)1P01149 165 aa8.46□□□□□ -1.06
LSR1LSR1 TEC1P18412 486 aa8.46□□□□□ -1.06
LSR1LSR1 PGS1P25578 521 aa8.46□□□□□ -1.06
LSR1LSR1 PPZ1P26570 692 aa8.46□□□□□ -1.06
LSR1LSR1 STB6P36085 766 aa8.46□□□□□ -1.06
LSR1LSR1 UIP5P36137 443 aa8.46□□□□□ -1.06
LSR1LSR1 MEP1P40260 492 aa8.46□□□□□ -1.06
LSR1LSR1 PAN6P40459 309 aa8.46□□□□□ -1.06
LSR1LSR1 IME4P41833 600 aa8.46□□□□□ -1.06
LSR1LSR1 MEP2P41948 499 aa8.46□□□□□ -1.06
LSR1LSR1 SLD3P53135 668 aa8.46□□□□□ -1.06
LSR1LSR1 CAF120P53836 1060 aa8.46□□□□□ -1.06
LSR1LSR1 MPS1P54199 764 aa8.46□□□□□ -1.06
LSR1LSR1 SSL1Q04673 461 aaPredicted RBP8.46□□□□□ -1.06
LSR1LSR1 GAL83Q04739 417 aa8.46□□□□□ -1.06
LSR1LSR1 BSP1Q06604 576 aa8.46□□□□□ -1.06
LSR1LSR1 RAD34Q06665 692 aa8.46□□□□□ -1.06
LSR1LSR1 MFG1Q07684 458 aa8.46□□□□□ -1.06
LSR1LSR1 PUS7Q08647 676 aaKnown RBP8.46□□□□□ -1.06
LSR1LSR1 NDD1Q08887 554 aa8.46□□□□□ -1.06
LSR1LSR1 TIM9O74700 87 aa8.45□□□□□ -1.06
LSR1LSR1 RAS2P01120 322 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 MET17P06106 444 aa8.45□□□□□ -1.06
LSR1LSR1 MAS1P10507 462 aa8.45□□□□□ -1.06
LSR1LSR1 SST2P11972 698 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 NUP2P32499 720 aa8.45□□□□□ -1.06
LSR1LSR1 TIP20P33891 701 aa8.45□□□□□ -1.06
LSR1LSR1 RMA1P36001 430 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 RCN1P36054 211 aa8.45□□□□□ -1.06
LSR1LSR1 TIM17P39515 158 aa8.45□□□□□ -1.06
LSR1LSR1 EMP65P40085 556 aa8.45□□□□□ -1.06
LSR1LSR1 ARF3P40994 183 aaRIP-Chip data8.45□□□□□ -1.06not detected
LSR1LSR1 SIP4P46954 829 aa8.45□□□□□ -1.06
LSR1LSR1 BIR1P47134 954 aa8.45□□□□□ -1.06
LSR1LSR1 IMD4P50094 524 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 LSG1P53145 640 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 IDP3P53982 420 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 YMR010WQ03687 405 aa8.45□□□□□ -1.06
LSR1LSR1 MGR3Q04472 501 aa8.45□□□□□ -1.06
LSR1LSR1 RTN1Q04947 295 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 HBT1Q07653 1046 aaKnown RBP8.45□□□□□ -1.06
LSR1LSR1 UIP4Q08926 304 aa8.45□□□□□ -1.06
LSR1LSR1 YPQ1Q12010 308 aa8.45□□□□□ -1.06
LSR1LSR1 YLR125WQ12138 136 aa8.45□□□□□ -1.06
LSR1LSR1 YLR046CQ12253 270 aa8.45□□□□□ -1.06
LSR1LSR1 RIB3Q99258 208 aa8.45□□□□□ -1.06
LSR1LSR1 GPH1P06738 902 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 CAD1P24813 409 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 AAR2P32357 355 aaPredicted RBP8.44□□□□□ -1.06
LSR1LSR1 PRP21P32524 280 aaPredicted RBP8.44□□□□□ -1.06
LSR1LSR1 SGE1P33335 543 aa8.44□□□□□ -1.06
LSR1LSR1 IRS4P36115 615 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 KTR4P38131 464 aa8.44□□□□□ -1.06
LSR1LSR1 YLF2P38746 405 aa8.44□□□□□ -1.06
LSR1LSR1 MTG2P38860 518 aa8.44□□□□□ -1.06
LSR1LSR1 YER034WP40022 185 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 PSP1P50896 841 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 DAM1P53267 343 aa8.44□□□□□ -1.06
LSR1LSR1 ESF2P53743 316 aaKnown RBP8.44□□□□□ -1.06
LSR1LSR1 FRE4P53746 719 aa8.44□□□□□ -1.06
LSR1LSR1 PIR1Q03178 341 aa8.44□□□□□ -1.06
LSR1LSR1 VTA1Q06263 330 aa8.44□□□□□ -1.06
LSR1LSR1 GPR1Q12361 961 aa8.44□□□□□ -1.06
LSR1LSR1 SNF8Q12483 233 aa8.44□□□□□ -1.06
LSR1LSR1 MHT1Q12525 324 aa8.44□□□□□ -1.06
LSR1LSR1 RPL6BP05739 176 aaKnown RBP8.43□□□□□ -1.06
LSR1LSR1 CDC21P06785 304 aa8.43□□□□□ -1.06
LSR1LSR1 GEX1P25596 615 aa8.43□□□□□ -1.06
LSR1LSR1 CRM1P30822 1084 aaKnown RBP8.43□□□□□ -1.06
LSR1LSR1 ISF1P32488 338 aa8.43□□□□□ -1.06
LSR1LSR1 SDH3P33421 198 aa8.43□□□□□ -1.06
LSR1LSR1 GEX2P36173 615 aa8.43□□□□□ -1.06
LSR1LSR1 AHP1P38013 176 aaKnown RBP8.43□□□□□ -1.06
LSR1LSR1 DSF2P38213 736 aa8.43□□□□□ -1.06
LSR1LSR1 HSE1P38753 452 aa8.43□□□□□ -1.06
LSR1LSR1 BTT1P40314 149 aaPredicted RBP8.43□□□□□ -1.06
LSR1LSR1 VPS62P53285 467 aa8.43□□□□□ -1.06
LSR1LSR1 IGO1P53897 168 aa8.43□□□□□ -1.06
LSR1LSR1 YPL107WQ02873 248 aa8.43□□□□□ -1.06
LSR1LSR1 RRP17Q04031 235 aaPredicted RBP8.43□□□□□ -1.06
LSR1LSR1 APC4Q04601 652 aa8.43□□□□□ -1.06
LSR1LSR1 BCH1Q05029 724 aa8.43□□□□□ -1.06
LSR1LSR1 EMG1Q06287 252 aaKnown RBP8.43□□□□□ -1.06
LSR1LSR1 THP1Q08231 455 aa8.43□□□□□ -1.06
LSR1LSR1 MCA1Q08601 432 aa8.43□□□□□ -1.06
LSR1LSR1 RCN2Q12044 265 aa8.43□□□□□ -1.06
LSR1LSR1 PST1Q12355 444 aa8.43□□□□□ -1.06
LSR1LSR1 TRM10Q12400 293 aa8.43□□□□□ -1.06
LSR1LSR1 MDM12Q92328 271 aa8.43□□□□□ -1.06
LSR1LSR1 YAR066WP0CX18 203 aa8.42□□□□□ -1.06
LSR1LSR1 YHR214WP0CX19 203 aa8.42□□□□□ -1.06
LSR1LSR1 GAL3P13045 520 aa8.42□□□□□ -1.06
LSR1LSR1 POL30P15873 258 aaKnown RBP8.42□□□□□ -1.06
LSR1LSR1 RHB1P25378 209 aa8.42□□□□□ -1.06
LSR1LSR1 GUT1P32190 709 aa8.42□□□□□ -1.06
LSR1LSR1 GDH2P33327 1092 aaKnown RBP8.42□□□□□ -1.06
LSR1LSR1 VPS21P36017 210 aaKnown RBP8.42□□□□□ -1.06
LSR1LSR1 IPT1P38954 527 aa8.42□□□□□ -1.06
LSR1LSR1 YAR028WP39548 234 aa8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms