RNA–Protein interactions for RNA: ENST00000565377.1

RPUSD1-205, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-205ENST00000565377 PXMP2Q9NR77 195 aa23.03■■□□□ 1.28
RPUSD1-205ENST00000565377 FLRT1Q9NZU1 646 aa23.03■■□□□ 1.28
RPUSD1-205ENST00000565377 VPS54Q9P1Q0 977 aa23.03■■□□□ 1.28
RPUSD1-205ENST00000565377 ZNFX1Q9P2E3 1918 aaKnown RBP23.03■■□□□ 1.28
RPUSD1-205ENST00000565377 RPTORQ8N122 1335 aa23.03■■□□□ 1.28
RPUSD1-205ENST00000565377 MSCO60682 206 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 STAM2O75886 525 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 PRKAR2AP13861 404 aaKnown RBP23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 STXBP2Q15833 593 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 MAP3K21Q5TCX8 1036 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 USP17L6PQ6QN14 398 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 FCHSD1Q86WN1 690 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 REXO1Q8N1G1 1221 aaKnown RBP23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 ZNF333Q96JL9 665 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 TAAR1Q96RJ0 339 aa23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.02■■□□□ 1.28
RPUSD1-205ENST00000565377 CYP2C19P33261 490 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 CACNB2Q08289 660 aaPredicted RBP23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 ST3GAL1Q11201 340 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 TYW1BQ6NUM6 668 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 FGD4Q96M96 766 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 VTA1Q9NP79 307 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 PCDHA4Q9UN74 947 aa23.01■■□□□ 1.27
RPUSD1-205ENST00000565377 SMCHD1A6NHR9 2005 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 JAK2O60674 1132 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 FDPSP14324 419 aaKnown RBP23■■□□□ 1.27
RPUSD1-205ENST00000565377 EDNRBP24530 442 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 CUL4AQ13619 759 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 INTS4Q96HW7 963 aaKnown RBP23■■□□□ 1.27
RPUSD1-205ENST00000565377 TMEM106CQ9BVX2 250 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 COL20A1Q9P218 1284 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 SMC3Q9UQE7 1217 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 PLXNA1Q9UIW2 1896 aa23■■□□□ 1.27
RPUSD1-205ENST00000565377 HTTP42858 3142 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 EIF3JO75822 258 aaKnown RBP22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 CCND2P30279 289 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 ACVR2BQ13705 512 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 SAFBQ15424 915 aaKnown RBP eCLIP22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 PDCD2LQ9BRP1 358 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 PCDHA6Q9UN73 950 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 PCDHA8Q9Y5H6 950 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 FRMPD4Q14CM0 1322 aa22.99■■□□□ 1.27
RPUSD1-205ENST00000565377 SNAI1O95863 264 aaPredicted RBP22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 NR3C2P08235 984 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 CYBAP13498 195 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 EIF2AK2P19525 551 aaKnown RBP22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 CLK2P49760 499 aaKnown RBP22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 PGM5Q15124 567 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 UBE2SQ16763 222 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 BLIDQ8IZY5 108 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 PHF20Q9BVI0 1012 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 RNF208Q9H0X6 261 aa22.98■■□□□ 1.27
RPUSD1-205ENST00000565377 SEPT4O43236 478 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 CCL5P13501 91 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 AKR1A1P14550 325 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 CNGA1P29973 690 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 GNPTABQ3T906 1256 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 KCNV1Q6PIU1 500 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 VSIG10LQ86VR7 867 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 PURBQ96QR8 312 aaKnown RBP22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 ZHX1Q9UKY1 873 aaPredicted RBP22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 FAM184BQ9ULE4 1060 aa22.97■■□□□ 1.27
RPUSD1-205ENST00000565377 HSP90AA1P07900 732 aaKnown RBP22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 BECN1Q14457 450 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 PCNX4Q63HM2 1172 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 IQSEC1Q6DN90 963 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 ABHD8Q96I13 439 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 AIFM3Q96NN9 605 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 ANO3Q9BYT9 981 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 ASTN1O14525 1302 aa22.96■■□□□ 1.27
RPUSD1-205ENST00000565377 PDCP20941 246 aa22.95■■□□□ 1.26
RPUSD1-205ENST00000565377 KRT2P35908 639 aa22.95■■□□□ 1.26
RPUSD1-205ENST00000565377 TRIM32Q13049 653 aa22.95■■□□□ 1.26
RPUSD1-205ENST00000565377 KRT25Q7Z3Z0 450 aa22.95■■□□□ 1.26
RPUSD1-205ENST00000565377 SCFD2Q8WU76 684 aa22.95■■□□□ 1.26
RPUSD1-205ENST00000565377 MMP1P03956 469 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 ZNF865P0CJ78 1059 aaPredicted RBP22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 MYCLP12524 364 aaPredicted RBP22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 GJB2P29033 226 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 SREBF1P36956 1147 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 JAKMIP3Q5VZ66 844 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 CDHR1Q96JP9 859 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 UNC93B1Q9H1C4 597 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 PAK6Q9NQU5 681 aaPredicted RBP22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 KCNJ14Q9UNX9 436 aa22.94■■□□□ 1.26
RPUSD1-205ENST00000565377 CCDC194A0A1B0GVG4 234 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 NKRFO15226 690 aaKnown RBP eCLIP22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 GJB1P08034 283 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 TGFB3P10600 412 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 RARBP10826 455 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 PDIA4P13667 645 aaKnown RBP22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 TTLL4Q14679 1199 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 PRAMEF19Q5SWL8 479 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 KRT40Q6A162 431 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 NLRX1Q86UT6 975 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 FBXO18Q8NFZ0 1043 aa22.93■■□□□ 1.26
RPUSD1-205ENST00000565377 SPC25Q9HBM1 224 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms