RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 SYNE3Q6ZMZ3 975 aa22.86■■□□□ 1.25
KNSTRN-210ENST00000560321 SYTL5Q8TDW5 730 aaPredicted RBP22.86■■□□□ 1.25
KNSTRN-210ENST00000560321 MTMR8Q96EF0 704 aa22.86■■□□□ 1.25
KNSTRN-210ENST00000560321 RIOX1Q9H6W3 641 aa22.86■■□□□ 1.25
KNSTRN-210ENST00000560321 SEC63Q9UGP8 760 aaKnown RBP22.86■■□□□ 1.25
KNSTRN-210ENST00000560321 MYH7BA7E2Y1 1941 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 TRIM43BA6NCK2 446 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 SMARCA1P28370 1054 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 CDK7P50613 346 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 FPGSQ05932 587 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 FAAP100Q0VG06 881 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 ITGA7Q13683 1181 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 SH3RF1Q7Z6J0 888 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 ZNF654Q8IZM8 581 aa22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 TRIM43Q96BQ3 446 aaPredicted RBP22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 RRP36Q96EU6 259 aaKnown RBP22.85■■□□□ 1.25
KNSTRN-210ENST00000560321 CTAGE5O15320 804 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 LIFRP42702 1097 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 KRT32Q14532 448 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 NECTIN1Q15223 517 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 LY9Q9HBG7 655 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 SLC12A7Q9Y666 1083 aa22.84■■□□□ 1.25
KNSTRN-210ENST00000560321 GCOM1H8Y6P7 765 aaPredicted RBP22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 EIF3JO75822 258 aaKnown RBP22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 TIMP1P01033 207 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 POLR2MP0CAP2 368 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 HSD17B4P51659 736 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 ANTXR2P58335 489 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 KCNV1Q6PIU1 500 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 TMEM199Q8N511 208 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 TAAR1Q96RJ0 339 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 PIGSQ96S52 555 aa22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
KNSTRN-210ENST00000560321 SUPT20HL2P0C7V6 817 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 GHRHRQ02643 423 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 SEPT14Q6ZU15 432 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 FAM126BQ8IXS8 530 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 CUL5Q93034 780 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 MTG1Q9BT17 334 aaPredicted RBP22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 SPZ1Q9BXG8 430 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 PXMP2Q9NR77 195 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 TAF6LQ9Y6J9 622 aa22.82■■□□□ 1.24
KNSTRN-210ENST00000560321 RANBP2P49792 3224 aaKnown RBP22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 GH1P01241 217 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 NR3C2P08235 984 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 MYL3P08590 195 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 HMGB1P09429 215 aaKnown RBP22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 EIF2AK2P19525 551 aaKnown RBP22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 PPIGQ13427 754 aaKnown RBP eCLIP22.81■■□□□ 1.242e-6■■■□□ 17.5
KNSTRN-210ENST00000560321 TBC1D5Q92609 795 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 LRCH3Q96II8 777 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 TBX21Q9UL17 535 aa22.81■■□□□ 1.24
KNSTRN-210ENST00000560321 SOX1O00570 391 aaPredicted RBP22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 SH2B2O14492 632 aaPredicted RBP22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 MFSD5Q6N075 450 aa22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 SLC43A3Q8NBI5 491 aa22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 NEK1Q96PY6 1258 aa22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 SENP2Q9HC62 589 aa22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 MRVI1Q9Y6F6 885 aa22.8■■□□□ 1.24
KNSTRN-210ENST00000560321 A6NJR5 290 aa22.79■■□□□ 1.24
KNSTRN-210ENST00000560321 PURAQ00577 322 aaKnown RBP22.79■■□□□ 1.24
KNSTRN-210ENST00000560321 COL20A1Q9P218 1284 aa22.79■■□□□ 1.24
KNSTRN-210ENST00000560321 SCN10AQ9Y5Y9 1956 aa22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 MYCLP12524 364 aaPredicted RBP22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 CCND2P30279 289 aa22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 FGD1P98174 961 aa22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 SHHQ15465 462 aa22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 RNPC3Q96LT9 517 aaKnown RBP22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 MTIF3Q9H2K0 278 aaKnown RBP22.78■■□□□ 1.24
KNSTRN-210ENST00000560321 CYTH3O43739 400 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 PPP1R11O60927 126 aaPredicted RBP22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 STAM2O75886 525 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 REC8O95072 547 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 CD4P01730 458 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 CASTP20810 708 aaKnown RBP22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 PTPN11Q06124 597 aaPredicted RBP22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 LAMC2Q13753 1193 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 TSGA10IPQ3SY00 556 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 GNPTABQ3T906 1256 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 NFRKBQ6P4R8 1299 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 DHX32Q7L7V1 743 aaKnown RBP22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 FCHSD1Q86WN1 690 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 DEFB123Q8N688 67 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 SMARCC2Q8TAQ2 1214 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 PDCD2LQ9BRP1 358 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 HIPK3Q9H422 1215 aa22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 RBM28Q9NW13 759 aaKnown RBP22.77■■□□□ 1.24
KNSTRN-210ENST00000560321 TGFB3P10600 412 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 HOXA13P31271 388 aaPredicted RBP22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 DGKDQ16760 1214 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 FAM47CQ5HY64 1035 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 CCDC62Q6P9F0 684 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 PSRC1Q6PGN9 363 aaPredicted RBP22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 SGMS1Q86VZ5 419 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 FANCBQ8NB91 859 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 PIBF1Q8WXW3 757 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 MYL10Q9BUA6 226 aa22.76■■□□□ 1.23
KNSTRN-210ENST00000560321 OPLAHO14841 1288 aa22.75■■□□□ 1.23
KNSTRN-210ENST00000560321 PSMC6P62333 389 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms