RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 KLHL7Q8IXQ5 586 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 ACSBG1Q96GR2 724 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 PURBQ96QR8 312 aaKnown RBP14.61□□□□□ -0.07
CAPN1-202ENST00000524773 KRT12Q99456 494 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 TRIM9Q9C026 710 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 ATP2C2O75185 946 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 CD248Q9HCU0 757 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 DCP1AQ9NPI6 582 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-202ENST00000524773 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 ANAPC4Q9UJX5 808 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 DISP2A7MBM2 1401 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 CCNE1P24864 410 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 MECOMQ03112 1051 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
CAPN1-202ENST00000524773 TRIM58Q8NG06 486 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 PACSIN1Q9BY11 444 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 PCDHA4Q9UN74 947 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 USO1O60763 962 aaKnown RBP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 HEXIM1O94992 359 aaKnown RBP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 TXKP42681 527 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 SH3GL2Q99962 352 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 PPANQ9NQ55 473 aaKnown RBP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 PAPPAQ13219 1627 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 DDAH1O94760 285 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 HDLBPQ00341 1268 aaKnown RBP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 CCDC170Q8IYT3 715 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 PNMA1Q8ND90 353 aa14.6□□□□□ -0.07
CAPN1-202ENST00000524773 JPH2Q9BR39 696 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-202ENST00000524773 ANO9A1A5B4 782 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 RCAN1P53805 252 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 EHHADHQ08426 723 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 KLHDC7AQ5VTJ3 777 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 MCTP2Q6DN12 878 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-202ENST00000524773 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 NDST4Q9H3R1 872 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 TMEM260Q9NX78 707 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 TIAM2Q8IVF5 1701 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 TOGARAM1Q9Y4F4 1720 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 UBAP1LF5GYI3 381 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 CALM1P0DP23 149 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 CALM2P0DP24 149 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 CALM3P0DP25 149 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-202ENST00000524773 CCDC152Q4G0S7 254 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.59□□□□□ -0.07
CAPN1-202ENST00000524773 BCCIPQ9P287 314 aaKnown RBP eCLIP14.59□□□□□ -0.07
CAPN1-202ENST00000524773 HYOU1Q9Y4L1 999 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 FLT1P17948 1338 aa14.59□□□□□ -0.07
CAPN1-202ENST00000524773 PALMO75781 387 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 EPHB4P54760 987 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 IFT88Q13099 833 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 ARL6IP4Q66PJ3 421 aaKnown RBP14.58□□□□□ -0.07
CAPN1-202ENST00000524773 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 OTUD6BQ8N6M0 293 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 LRRC4CQ9HCJ2 640 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 BIN2Q9UBW5 565 aaPredicted RBP14.58□□□□□ -0.07
CAPN1-202ENST00000524773 SAP30BPQ9UHR5 308 aaKnown RBP14.58□□□□□ -0.07
CAPN1-202ENST00000524773 CICQ96RK0 1608 aaPredicted RBP14.58□□□□□ -0.07
CAPN1-202ENST00000524773 TAF1P21675 1872 aa14.58□□□□□ -0.07
CAPN1-202ENST00000524773 GOLGA8KD6RF30 607 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 CPP00450 1065 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 LSP1P33241 339 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 PAFAH1B1P43034 410 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 TRAPPC10P48553 1259 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 SPRED3Q2MJR0 410 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 VWA3BQ502W6 1294 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 CFAP58Q5T655 872 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 PIK3R5Q8WYR1 880 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 FAM84BQ96KN1 310 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-202ENST00000524773 NUDT12Q9BQG2 462 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 PLAGL2Q9UPG8 496 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 SIK3Q9Y2K2 1263 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 KCNB1Q14721 858 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 IQCEQ6IPM2 695 aa14.58□□□□□ -0.08
CAPN1-202ENST00000524773 FNBP4Q8N3X1 1017 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-202ENST00000524773 CDCA7Q9BWT1 371 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-202ENST00000524773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.58□□□□□ -0.08
CAPN1-202ENST00000524773 SPATA31A1Q5TZJ5 1347 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 POTEMA6NI47 508 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 MYMKA6NI61 221 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 OPA1O60313 960 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 NAA35Q5VZE5 725 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 DHTKD1Q96HY7 919 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-202ENST00000524773 NUP58Q9BVL2 599 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
CAPN1-202ENST00000524773 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms