RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 KRT32Q14532 448 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 SEPT14Q6ZU15 432 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 SH3RF1Q7Z6J0 888 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 MB21D2Q8IYB1 491 aaPredicted RBP16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 CUL5Q93034 780 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 TAAR1Q96RJ0 339 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 PIGSQ96S52 555 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 RIOX1Q9H6W3 641 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 FRMPD3Q5JV73 1810 aa16.16■□□□□ 0.18
LDLRAP1-205ENST00000484476 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 TIMP1P01033 207 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 EDNRBP24530 442 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 SMARCA1P28370 1054 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 CDK7P50613 346 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 KCNV1Q6PIU1 500 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 STOX1Q6ZVD7 989 aa16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 MTG1Q9BT17 334 aaPredicted RBP16.15■□□□□ 0.18
LDLRAP1-205ENST00000484476 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 LIFRP42702 1097 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 PIBF1Q8WXW3 757 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 TBC1D5Q92609 795 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 NEK1Q96PY6 1258 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
LDLRAP1-205ENST00000484476 CTAGE5O15320 804 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 GH1P01241 217 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 CENPBP07199 599 aaPredicted RBP16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 NR3C2P08235 984 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 HSD17B4P51659 736 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.179e-8■■■■□ 20
LDLRAP1-205ENST00000484476 LRCH3Q96II8 777 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
LDLRAP1-205ENST00000484476 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 CCND2P30279 289 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 ANTXR2P58335 489 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 CHMP4BP1P59074 171 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 SHHQ15465 462 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 FAM47CQ5HY64 1035 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 FCHSD1Q86WN1 690 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 SPZ1Q9BXG8 430 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 MTIF3Q9H2K0 278 aaKnown RBP16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
LDLRAP1-205ENST00000484476 A6NJR5 290 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 SOX1O00570 391 aaPredicted RBP16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 SH2B2O14492 632 aaPredicted RBP16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 REC8O95072 547 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 FAM126BQ8IXS8 530 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 FANCBQ8NB91 859 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 MYL10Q9BUA6 226 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 TBX21Q9UL17 535 aa16.11■□□□□ 0.17
LDLRAP1-205ENST00000484476 TGFB3P10600 412 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 PSMC6P62333 389 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 PURAQ00577 322 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 DGKDQ16760 1214 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 SLC43A3Q8NBI5 491 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 PPP1R12CQ9BZL4 782 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 COL20A1Q9P218 1284 aa16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
LDLRAP1-205ENST00000484476 DNAH12Q6ZR08 3092 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 CYTH3O43739 400 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 STAM2O75886 525 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 GHRHRQ02643 423 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 RETREG2Q8NC44 543 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 PDCD2LQ9BRP1 358 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 TRPV6Q9H1D0 765 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 ALDH8A1Q9H2A2 487 aaPredicted RBP16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 MCM3APO60318 1980 aa16.09■□□□□ 0.17
LDLRAP1-205ENST00000484476 RANBP2P49792 3224 aaKnown RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms