RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 POLR2MP0CAP2 368 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 EDNRBP24530 442 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 LIFRP42702 1097 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 NKX3-2P78367 333 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 IRX5P78411 483 aaPredicted RBP22.51■■□□□ 1.19
COMMD1-208ENST00000472729 SEPT14Q6ZU15 432 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 MTMR8Q96EF0 704 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 MYL10Q9BUA6 226 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 SEZ6LQ9BYH1 1024 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 POLR3EQ9NVU0 708 aa22.51■■□□□ 1.19
COMMD1-208ENST00000472729 PLXNA1Q9UIW2 1896 aa22.5■■□□□ 1.19
COMMD1-208ENST00000472729 HMGB1P09429 215 aaKnown RBP22.5■■□□□ 1.19
COMMD1-208ENST00000472729 EIF2AK2P19525 551 aaKnown RBP22.5■■□□□ 1.19
COMMD1-208ENST00000472729 BADQ92934 168 aa22.5■■□□□ 1.19
COMMD1-208ENST00000472729 RBM47A0AV96 593 aaKnown RBP22.49■■□□□ 1.19
COMMD1-208ENST00000472729 TRIM43BA6NCK2 446 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 REC8O95072 547 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 MYL3P08590 195 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 ITGA7Q13683 1181 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 SH3RF1Q7Z6J0 888 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 CUL5Q93034 780 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 TRIM43Q96BQ3 446 aaPredicted RBP22.49■■□□□ 1.19
COMMD1-208ENST00000472729 LRRC2Q9BYS8 371 aa22.49■■□□□ 1.19
COMMD1-208ENST00000472729 KPNA6O60684 536 aa22.48■■□□□ 1.19
COMMD1-208ENST00000472729 EIF3JO75822 258 aaKnown RBP22.48■■□□□ 1.19
COMMD1-208ENST00000472729 SMARCA1P28370 1054 aa22.48■■□□□ 1.19
COMMD1-208ENST00000472729 HSD17B4P51659 736 aa22.48■■□□□ 1.19
COMMD1-208ENST00000472729 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
COMMD1-208ENST00000472729 PXMP2Q9NR77 195 aa22.48■■□□□ 1.19
COMMD1-208ENST00000472729 KIAA0355O15063 1070 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 CTAGE5O15320 804 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 PPP1R11O60927 126 aaPredicted RBP22.47■■□□□ 1.19
COMMD1-208ENST00000472729 NR3C2P08235 984 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 MYCLP12524 364 aaPredicted RBP22.47■■□□□ 1.19
COMMD1-208ENST00000472729 HOXA13P31271 388 aaPredicted RBP22.47■■□□□ 1.19
COMMD1-208ENST00000472729 FAAP100Q0VG06 881 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 DHX32Q7L7V1 743 aaKnown RBP22.47■■□□□ 1.19
COMMD1-208ENST00000472729 FCHSD1Q86WN1 690 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 COL20A1Q9P218 1284 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 NAP1L2Q9ULW6 460 aaPredicted RBP22.47■■□□□ 1.19
COMMD1-208ENST00000472729 MRVI1Q9Y6F6 885 aa22.47■■□□□ 1.19
COMMD1-208ENST00000472729 CYTH3O43739 400 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 RXRAP19793 462 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 LRIT3Q3SXY7 679 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 MICU3Q86XE3 530 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 FANCBQ8NB91 859 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 SMARCC2Q8TAQ2 1214 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 MTG1Q9BT17 334 aaPredicted RBP22.46■■□□□ 1.19
COMMD1-208ENST00000472729 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 PCDH10Q9P2E7 1040 aa22.46■■□□□ 1.19
COMMD1-208ENST00000472729 GH1P01241 217 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 PTGS1P23219 599 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 CDK7P50613 346 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 FPGSQ05932 587 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 TMEM63BQ5T3F8 832 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 KCNV1Q6PIU1 500 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 FRMPD3Q5JV73 1810 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 TRIOBPQ9H2D6 2365 aa22.45■■□□□ 1.18
COMMD1-208ENST00000472729 TIMP1P01033 207 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 CCND2P30279 289 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 CHMP4BP1P59074 171 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 TSGA10IPQ3SY00 556 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 SGMS1Q86VZ5 419 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 RAB11FIP4Q86YS3 637 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 CCDC82Q8N4S0 544 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 TMEM199Q8N511 208 aa22.44■■□□□ 1.18
COMMD1-208ENST00000472729 RBM28Q9NW13 759 aaKnown RBP22.44■■□□□ 1.18
COMMD1-208ENST00000472729 SUPT20HL2P0C7V6 817 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 PSMC6P62333 389 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 GHRHRQ02643 423 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 LY6KQ17RY6 165 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 FAM47CQ5HY64 1035 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 PDCD2LQ9BRP1 358 aa22.43■■□□□ 1.18
COMMD1-208ENST00000472729 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 A6NJR5 290 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 OPLAHO14841 1288 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 ZBTB43O43298 467 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 PLEKHA8P1O95397 391 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 PSMA5P28066 241 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 PURAQ00577 322 aaKnown RBP22.42■■□□□ 1.18
COMMD1-208ENST00000472729 SLC35G1Q2M3R5 365 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 GNPTABQ3T906 1256 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 FAM126BQ8IXS8 530 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 DHX37Q8IY37 1157 aaKnown RBP22.42■■□□□ 1.18
COMMD1-208ENST00000472729 RASEFQ8IZ41 740 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 CMTR1Q8N1G2 835 aaKnown RBP22.42■■□□□ 1.18
COMMD1-208ENST00000472729 SRBD1Q8N5C6 995 aaKnown RBP22.42■■□□□ 1.18
COMMD1-208ENST00000472729 COPS5Q92905 334 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 LRCH3Q96II8 777 aa22.42■■□□□ 1.18
COMMD1-208ENST00000472729 SOX1O00570 391 aaPredicted RBP22.41■■□□□ 1.18
COMMD1-208ENST00000472729 CASTP20810 708 aaKnown RBP22.41■■□□□ 1.18
COMMD1-208ENST00000472729 PPIGQ13427 754 aaKnown RBP eCLIP22.41■■□□□ 1.18
COMMD1-208ENST00000472729 LAMC2Q13753 1193 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 PGM5Q15124 567 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 TCEANC2Q96MN5 208 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 JAKMIP1Q96N16 626 aaKnown RBP22.41■■□□□ 1.18
COMMD1-208ENST00000472729 PPP1R12CQ9BZL4 782 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 PSTPIP2Q9H939 334 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 TBX21Q9UL17 535 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms